| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1159 |
|---|
| Symbol | |
|---|
| ID | 3775109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 1192792 |
|---|
| End bp | 1193292 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637799585 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_400176 |
|---|
| Protein GI | 81299968 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.462298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCAG ACAAAATCGA TCGCATTCTT GAGCAGTGGC AGCAGGAACT GCCCCAGGTC
AACGTCGCTC CGCTCGCTGT CACGGGTCGG TTGTTGCGCA TTGCCCGTCT GCTCGAAAAG
CAGCGCGAGA CCTTGCTGGC GAAGTACGGT CTCAGTGTTT GGTCCTTTGA TGTGCTGGCA
ACGCTGCGCC GTCAGGGGCC GCCCTATCAA CTCAAGCCAA CGGATCTCTA CAGCCTGTTG
ATGCTCTCCT CGGGGGCGAT GACTAATCGC ATCGATCGCC TAGAGCAGGA TGGAATTGTG
GTGCGATCGC GAAGTGGCAG CGATCGCCGT AGCGTGATTG TGCAACTGAC GCCCAAAGGC
ATTGCGCTTG CAGATGCAGT GATGCCTGTC CTTTTTGCTC AAGAAGGGGC GCTGCTCTCC
GAATTTGCGA CTCCAGAGGA GGTGGAGAGA CTTGTACCGC TCCTGAGAAG ACTGCTGTTA
GCAATGGATG CAGCTGAGTA A
|
|---|
| Protein sequence | MASDKIDRIL EQWQQELPQV NVAPLAVTGR LLRIARLLEK QRETLLAKYG LSVWSFDVLA
TLRRQGPPYQ LKPTDLYSLL MLSSGAMTNR IDRLEQDGIV VRSRSGSDRR SVIVQLTPKG
IALADAVMPV LFAQEGALLS EFATPEEVER LVPLLRRLLL AMDAAE
|
|---|
| |