Gene Synpcc7942_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1159 
Symbol 
ID3775109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1192792 
End bp1193292 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content57% 
IMG OID637799585 
ProductMarR family transcriptional regulator 
Protein accessionYP_400176 
Protein GI81299968 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.462298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAG ACAAAATCGA TCGCATTCTT GAGCAGTGGC AGCAGGAACT GCCCCAGGTC 
AACGTCGCTC CGCTCGCTGT CACGGGTCGG TTGTTGCGCA TTGCCCGTCT GCTCGAAAAG
CAGCGCGAGA CCTTGCTGGC GAAGTACGGT CTCAGTGTTT GGTCCTTTGA TGTGCTGGCA
ACGCTGCGCC GTCAGGGGCC GCCCTATCAA CTCAAGCCAA CGGATCTCTA CAGCCTGTTG
ATGCTCTCCT CGGGGGCGAT GACTAATCGC ATCGATCGCC TAGAGCAGGA TGGAATTGTG
GTGCGATCGC GAAGTGGCAG CGATCGCCGT AGCGTGATTG TGCAACTGAC GCCCAAAGGC
ATTGCGCTTG CAGATGCAGT GATGCCTGTC CTTTTTGCTC AAGAAGGGGC GCTGCTCTCC
GAATTTGCGA CTCCAGAGGA GGTGGAGAGA CTTGTACCGC TCCTGAGAAG ACTGCTGTTA
GCAATGGATG CAGCTGAGTA A
 
Protein sequence
MASDKIDRIL EQWQQELPQV NVAPLAVTGR LLRIARLLEK QRETLLAKYG LSVWSFDVLA 
TLRRQGPPYQ LKPTDLYSLL MLSSGAMTNR IDRLEQDGIV VRSRSGSDRR SVIVQLTPKG
IALADAVMPV LFAQEGALLS EFATPEEVER LVPLLRRLLL AMDAAE