Gene Synpcc7942_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1155 
Symbol 
ID3775105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1182479 
End bp1183195 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content57% 
IMG OID637799581 
Producthypothetical protein 
Protein accessionYP_400172 
Protein GI81299964 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCGAG CCGCGATCGC GCCTGAGATG AGTACTGCGA CGAGTGGTGA ACTCTACCCG 
CCATCCTTCA AAATCAGCGC AGGACCTTTC ACTGACTCCT GCTCTGCTGC AGCCATGATC
TACAGCACTG CTGACTTAAT TGAGATTTTG GCGCGTGAAC GACAGGCCTG CCTCCGAGGC
GATCGCTTGG ATTTATTGAC CCCGCCAACA GGACATCCGG TTTTCGATCG CTTCTTCCAA
ACAGAAGGTC TGCAGAAGTA CGCAGCGTTT GCGGGCTTCC GCAGTCGTGT TCAGGACTAT
CAGCAGCAAC ATCACATCTC CGGCTTGGTC TGGCAGCAAT TGCGGACGGA TGGCGCTTTT
CTCCAGTTTC CTGAAGTCCA TCCAGATCTT TTGGCTTTGG AGAGCGATCG CTTACAACTG
CAAGCGGCCC TGCCGTCCGT GCTGGGGTTT TGGTGGCAGG TTTGTCGAGG GTTGGACTGC
TTCCTAGCAG TTGATCGCGG TCGAGCCTTT GAACCGATTC AGCAAGCAGC GATCGCCCCG
ATCGCAGCCC GCAGTGAGTG GGCTACCTTA CGCCAAGAGC CGCGATCGCA AGGTCAGGAG
TGGATTCTGC AATTAAGTTG GGGCGACCCC GCCGAAGCAC AAACCTGGCG GCAGTGGCCT
CAATCTGGCA GTGAATACAT CCATGCGGTT CCCACAGGAA CCACCCCGAT CGCCTAG
 
Protein sequence
MGRAAIAPEM STATSGELYP PSFKISAGPF TDSCSAAAMI YSTADLIEIL ARERQACLRG 
DRLDLLTPPT GHPVFDRFFQ TEGLQKYAAF AGFRSRVQDY QQQHHISGLV WQQLRTDGAF
LQFPEVHPDL LALESDRLQL QAALPSVLGF WWQVCRGLDC FLAVDRGRAF EPIQQAAIAP
IAARSEWATL RQEPRSQGQE WILQLSWGDP AEAQTWRQWP QSGSEYIHAV PTGTTPIA