Gene Synpcc7942_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1143 
Symbol 
ID3775093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1168605 
End bp1169201 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content53% 
IMG OID637799569 
Producthypothetical protein 
Protein accessionYP_400160 
Protein GI81299952 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTG TTCAGGAACC GCTTGGCTAT TCTAGTTCGG CTTCGATCCT TGAAAACCGC 
GGCAGGATTG CCATCTTCAT CGATGGTTCT AACCTGTTTT ATGCGGCTTT GCAGCTCGGC
ATCGAAATTG ACTACACCAA GTTGTTGGCC TGTTTGACCA ATGGATCGCG TCTGTTGCGA
TCGTTCTTTT ATACCGGAGT GGATCGAAGC AACGAGAAGC AACAGGGCTT TCTGTTGTGG
ATGCGTCGTA ACGGCTATCG CGTTGTGGCG AAGGATTTGA TCCAGCTGCC CGACGGCACA
AAAAAAGCCA ACTTGGATGT TGAAATCGCT GTTGATATGT TGGCCTTGGC CGGCACCTAC
GACACGGCGG TGCTGGTCAG TGGCGACGGA GATCTCGCCT ACGCGGTGGA AGTGGTAGGC
TATCGCGGCG TGCGGGTAGA AGTCGTCAGC CTGCGATCGA TGACTAGCGA TAACTTGATC
AATGTTGCCG ATCGCTACAT CGATCTCGAA AGCCTGAAAG CGAGCATTCA AAAGCTCCCA
CGTCAGCCTT ACAGCCGGTC GGTTGCAGTG CCCCCAGAGA GTGTAAACCC GTCCTGA
 
Protein sequence
MATVQEPLGY SSSASILENR GRIAIFIDGS NLFYAALQLG IEIDYTKLLA CLTNGSRLLR 
SFFYTGVDRS NEKQQGFLLW MRRNGYRVVA KDLIQLPDGT KKANLDVEIA VDMLALAGTY
DTAVLVSGDG DLAYAVEVVG YRGVRVEVVS LRSMTSDNLI NVADRYIDLE SLKASIQKLP
RQPYSRSVAV PPESVNPS