Gene Synpcc7942_1137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1137 
Symbol 
ID3775087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1160762 
End bp1161508 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content59% 
IMG OID637799563 
Producthypothetical protein 
Protein accessionYP_400154 
Protein GI81299946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.141053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGC CTGGTGCGCT GCAAGCAGCC CTGTCCCAAG GTCGTGCACT GAAAGTGATT 
AGCGGCCTTG CTAACTTTGA TGCCGATCTC GTTGCGGCAG TTGTGCGCGC AGCCGATCGC
GGTGGCGCTA CGTTCGTGGA TATTGCTTGC GATGCCAGCT TGGTCCGTTT GGCGCGTCAA
CAGACAGCTT TGCCGATCTG CGTCTCTTCG GTAGAACCGA CAGCGTTCTT GGCAGCGGTT
GAAGCCGGTG CTGATCTGAT CGAAATCGGC AACTACGACA GCTTCTACGC CCAAGGTCGG
GAGTTCAGCG CCGCAGAAGT GCTGGAACTA ACCCAAGCGA CGCGAGCCTT GCTGCCGCAA
ATCACCCTGT CGGTGACTGT TCCCCACACG CTACCGCTGG ACCAACAAGC GACTTTGGCA
GAACAACTGG TGGTTGCAGG TGCGGACATC ATCCAAACCG AAGGCGGTAC CAGCTCGGCT
CCGACCCATG CAGGCGTTCT CGGCCTGATC GAAAAAGCAG CCCCGACCTT GGCAGCCGCT
TCCGTGATTT CCAAAGCAGT AAACGTGCCC GTGCTCTGCG CTTCGGGCCT GTCGGATGTC
ACGGCTCCCA TGGCGATCGC AGCCGGTGCA GCCGGCATCG GTGTTGGTTC AGCCATCAAC
CGCCTCGACA ATGAGCTGGC GATGATTGCT GCAGTTCAAC GCTTCGTTGA AGCCCTCGAT
CGCGCTCGAG TTGCTCAAGC ACACTAA
 
Protein sequence
MSMPGALQAA LSQGRALKVI SGLANFDADL VAAVVRAADR GGATFVDIAC DASLVRLARQ 
QTALPICVSS VEPTAFLAAV EAGADLIEIG NYDSFYAQGR EFSAAEVLEL TQATRALLPQ
ITLSVTVPHT LPLDQQATLA EQLVVAGADI IQTEGGTSSA PTHAGVLGLI EKAAPTLAAA
SVISKAVNVP VLCASGLSDV TAPMAIAAGA AGIGVGSAIN RLDNELAMIA AVQRFVEALD
RARVAQAH