Gene Synpcc7942_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1118 
Symbol 
ID3775068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1135064 
End bp1136614 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content47% 
IMG OID637799544 
Productmercuric reductase 
Protein accessionYP_400135 
Protein GI81299927 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.583122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCATCAC AGTCTTTCAT AGCGTTCGTG AGTCCTGCCG ATTCTCACAA CCAATTACTG 
ATCGATCGCG TCCATCCCCA GGATTGGATA AACCCCGAGC CTGCTGATTG CTATGACCTC
GTGGTGATTG GGGCAGGAAC AACCGGGCTC GTGGTCGCTG CTGGAGCGAC AGGACTAGGC
TTAGGGCTAA AAGTTGCCTT AATTGAAAAG CAACTCATGG GTGGTGATTG CCTCAATTTT
GGTTGTGTTC CTTCTAAGGC ATTAATTCGT TCTTCGCGAG TGATTGGGGA GCTCCAACGT
GCAAACACAC TGGGTATTCA AGTCGCTCCA GAGGCAATCG CCGTCGATTT TGCCGCGGTT
ATGGAGCGTC TTCGGAAAGT GAGAGCAGGC ATGAGTGTGC ATGACTCAGC TCAACGGTTC
CAAGCGCTAG GGGTTGATGT CTTTTTGGGC CAAGCTTGCT TTTGCGATCG CAACACAATT
CAAGTGGGTG AGGCAACACT CAAGTTTCGA AAAGCTGTGA TTGCAACTGG AGCGCGAGCT
ACTTACCCAA ATATTGAAGG CTTGGAGGCT TCTGGCTTTT TAACCAATGA GACTGTTTTC
TCTCTGTCTA ATTGTCCCCG TCGCTTAGCT GTCATTGGCG GAGGGCCGAT CGGTTGCGAG
TTAGCTCAGG CGTTCCAACG TCTAGGCAGT CAAGTCACGC TTTTTCAAAG GCGATCGCAA
CTGTTACCTA AAGAGGATTT CGAGGCCGCT GAAGTCATTC AAAACCAGTT GAGAGCAGAT
GGCGTACAAG TTTGTCTCTC AGCCGAAATC ACACGGATCG AAAGAACAGC GAGTGGTAAA
TTAATCACCT TTCGGCAAGA AGGTCGAGAA TCTGTTCTTG AAGTTGATGA GATTTTAGTT
GGAACCGGGC GATCGCCAAA TGTTCAAGAT CTCAACCTAG AAGCAGTTGG CGTTGATTAT
GACTCAGTTC ATGGAGTTAA AGTCAATGAC TATCTACAAA CAACCAATCC TAAAATTTAT
GCGGCTGGTG ATGTCTGTTC ACCCTGGAAG TTCACCCATG CAGCGGATGC GGCAGCTCGG
ATTGTCATTA AAAATGCGCT CTTTTCACCC TTTGGGCTTG GCAAATCAAA AGTCAGCGAT
TTGATAATTC CCCGCGTTAC TTTTACTGAT CCAGAAGTCG CCCATGTTGG TCTCTCAGAA
ACTGCAGCGC GACATCAAGG AATTGCGATC GCAACAATTA CCATTCCTCT CGATCAAGTC
GATCGCACTG TTTTAGATGG AGAGACAGCG GGGTTTATTA GAATTCATCA TCAGCCAAAC
TCAGATAAAA TTCTGGGCGC AACGATTGTG GCTCCTCACG CAGGTGAAAT GATTTCAGAG
GTCACTACCG CGATCGCAAA TCAGTTAGGG ATGAGTGCTC TCAGTAGTGT CATTCATCCC
TATCCAACCC AAGCGGAAGG AATTAAAAAG GCAGCTGATA ATTACCGGCG TACTTTACTA
ACACCAATGA CAAAACAGCT ACTGAAATTA CTAATGATAT TTTCAAAATA A
 
Protein sequence
MSSQSFIAFV SPADSHNQLL IDRVHPQDWI NPEPADCYDL VVIGAGTTGL VVAAGATGLG 
LGLKVALIEK QLMGGDCLNF GCVPSKALIR SSRVIGELQR ANTLGIQVAP EAIAVDFAAV
MERLRKVRAG MSVHDSAQRF QALGVDVFLG QACFCDRNTI QVGEATLKFR KAVIATGARA
TYPNIEGLEA SGFLTNETVF SLSNCPRRLA VIGGGPIGCE LAQAFQRLGS QVTLFQRRSQ
LLPKEDFEAA EVIQNQLRAD GVQVCLSAEI TRIERTASGK LITFRQEGRE SVLEVDEILV
GTGRSPNVQD LNLEAVGVDY DSVHGVKVND YLQTTNPKIY AAGDVCSPWK FTHAADAAAR
IVIKNALFSP FGLGKSKVSD LIIPRVTFTD PEVAHVGLSE TAARHQGIAI ATITIPLDQV
DRTVLDGETA GFIRIHHQPN SDKILGATIV APHAGEMISE VTTAIANQLG MSALSSVIHP
YPTQAEGIKK AADNYRRTLL TPMTKQLLKL LMIFSK