Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1117 |
Symbol | |
ID | 3775067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1134381 |
End bp | 1135043 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637799543 |
Product | hypothetical protein |
Protein accession | YP_400134 |
Protein GI | 81299926 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.616893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCTT CTTTTGAATC TTCAGCAATT AACTCTTCTG AGATCAAGTT GCTTGAATTA CCAATTATTA GAGATGCTAT TGGAAAAGCC CAGGCTGATG GGGTTGATTG GGGTAAAAGT TTTGTCAATG ATGATCGCTG GAACGGTGAC TGTGACCGCA TGTGTGATCA TGCCATTCGA GAAGCAATGA TCTGGTCAGC AGGGCAAGGA GCTGTTACTA GTGTGGGCGG AGCTGCCACA ATCGTTCCTG GCCTGGCTGC TGATCTTTCG CTCTTTCTTT ATTCTCAAAT CAAACTTGCT GCAGCTTTGT TTACTATCCA TGGAATTGAT GTGAGAGATG AAGAGGTTCG ACCGTTGCTA CTGGCCGCAG CTGCAGGCAT TGCCGTAACA GATTTAATAG ACATTATTGG CGTTAAAGTT GCTCAAAATG CCGTTCGCAG AACACTCATG TCTATCCCAG GCAAAACACT AGCCCAAATC AATAGAATTC TTGGTGTCAG ATTAATTTCA AAAGCCGGTC AAAAAACTAT GACTAATATG GTTAAATTAG TTCCTATTGT TGGTGCAGTT GCAGGTGGAG GTGTTAATGC AGCAATGATG GGAGCCTCAG GAAAGCTTAT TCAGAAGTTT ATTGCTGACT ATAAGTCGGC ACAGTTAAGT TAA
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Protein sequence | MTSSFESSAI NSSEIKLLEL PIIRDAIGKA QADGVDWGKS FVNDDRWNGD CDRMCDHAIR EAMIWSAGQG AVTSVGGAAT IVPGLAADLS LFLYSQIKLA AALFTIHGID VRDEEVRPLL LAAAAGIAVT DLIDIIGVKV AQNAVRRTLM SIPGKTLAQI NRILGVRLIS KAGQKTMTNM VKLVPIVGAV AGGGVNAAMM GASGKLIQKF IADYKSAQLS
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