Gene Synpcc7942_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1117 
Symbol 
ID3775067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1134381 
End bp1135043 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content43% 
IMG OID637799543 
Producthypothetical protein 
Protein accessionYP_400134 
Protein GI81299926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.616893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTT CTTTTGAATC TTCAGCAATT AACTCTTCTG AGATCAAGTT GCTTGAATTA 
CCAATTATTA GAGATGCTAT TGGAAAAGCC CAGGCTGATG GGGTTGATTG GGGTAAAAGT
TTTGTCAATG ATGATCGCTG GAACGGTGAC TGTGACCGCA TGTGTGATCA TGCCATTCGA
GAAGCAATGA TCTGGTCAGC AGGGCAAGGA GCTGTTACTA GTGTGGGCGG AGCTGCCACA
ATCGTTCCTG GCCTGGCTGC TGATCTTTCG CTCTTTCTTT ATTCTCAAAT CAAACTTGCT
GCAGCTTTGT TTACTATCCA TGGAATTGAT GTGAGAGATG AAGAGGTTCG ACCGTTGCTA
CTGGCCGCAG CTGCAGGCAT TGCCGTAACA GATTTAATAG ACATTATTGG CGTTAAAGTT
GCTCAAAATG CCGTTCGCAG AACACTCATG TCTATCCCAG GCAAAACACT AGCCCAAATC
AATAGAATTC TTGGTGTCAG ATTAATTTCA AAAGCCGGTC AAAAAACTAT GACTAATATG
GTTAAATTAG TTCCTATTGT TGGTGCAGTT GCAGGTGGAG GTGTTAATGC AGCAATGATG
GGAGCCTCAG GAAAGCTTAT TCAGAAGTTT ATTGCTGACT ATAAGTCGGC ACAGTTAAGT
TAA
 
Protein sequence
MTSSFESSAI NSSEIKLLEL PIIRDAIGKA QADGVDWGKS FVNDDRWNGD CDRMCDHAIR 
EAMIWSAGQG AVTSVGGAAT IVPGLAADLS LFLYSQIKLA AALFTIHGID VRDEEVRPLL
LAAAAGIAVT DLIDIIGVKV AQNAVRRTLM SIPGKTLAQI NRILGVRLIS KAGQKTMTNM
VKLVPIVGAV AGGGVNAAMM GASGKLIQKF IADYKSAQLS