Gene Synpcc7942_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1116 
Symbolpgk 
ID3775066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1132968 
End bp1134176 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content56% 
IMG OID637799542 
Productphosphoglycerate kinase 
Protein accessionYP_400133 
Protein GI81299925 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.206718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAAAA GAACTTTAGC AAGCCTGACC GCCGCTGACT TAGAGGGCAA GCGGGTCCTC 
GTGCGTGTCG ACTTCAATGT CCCTTTGGAC GGCAATGGGA AAATTACGGA TGACACCCGC
ATCCGTGCGG CTCTGCCGAC GATTCGCTAC CTGTCGGAAA GTGGTGCCAA GGTGATTCTG
GTCAGCCACT TTGGTCGTCC CAAAGGCAAG CCCGTCGAGA GCATGCGCTT AACGCCGGTG
GCTGAGCGCC TCTCGGAATT GCTGGGTCGC CCTGTTGTTA AGACAACCGA TGCTGTGGGT
GCCGGTGCCG AAGCGCAAGT GGCAGCCACC AGCAATGGCC AAGTCGTGTT GTTGGAGAAC
GTGCGTTTCC ACGCTGAGGA AGAAGCCAAC GACGCTGAAT TTGCGAAAGC ACTAGCTAGC
TTGGCCGATA TCTACGTCAA TGATGCCTTT GGTGCTGCTC ACCGGGCTCA CGCTTCCACG
GCTGGCGTGA CTGAATATCT TTCGCCTTGC GTGGCTGGTT ACCTGTTGGA GAAAGAGTTG
CAATACCTAC AAGCCGCGAT CGACAATCCC CAACGGCCCT TGGCTGCGAT CGTCGGCGGT
TCGAAAGTTT CCAGCAAAAT TGGCGTGATC GAAACGCTGC TGGATAAGTG CGACAAACTG
CTGATTGGTG GCGGCATGAT CTTTACCTTC TACAAAGCCC AAGGACTTTC GGTCGGCGGC
TCACTGGTAG AAGAGGACAA ACTCGATCTG GCGCGATCGC TGATGGCTAA AGCGCAAGAA
AAAGGCGTGC AACTGTTGCT GCCCGTGGAT GTAGTAGTGG CCGATAAGTT TGCGCCGGAT
GCTAATGCCA AAACCGTGGC GATCGATGCG ATTCCCGATG GCTGGATGGG CCTAGATATC
GGACCTGAGT CGGTCAAGCA ATTCGAGGAA GCCTTGGCCG ATTGCCGCTC GGTCATTTGG
AATGGCCCGA TGGGCGTATT TGAGTTCGAT CAATTCGCTG TCGGTACCGA AGCGATCGCT
CGTAGCTTGG CAGGACTGAC CCGCAAGGGT GCAACCACGA TCATTGGTGG TGGTGACTCG
GTCGCTGCCG TTGAGAAAGT CGGTGTTGCT TCGGAAATGA GCCACATTTC CACCGGTGGT
GGTGCCAGCT TGGAACTGCT GGAAGGCAAA GTCCTGCCGG GTGTGGCTGC ACTGGATGAC
GCTGCCTAA
 
Protein sequence
MSKRTLASLT AADLEGKRVL VRVDFNVPLD GNGKITDDTR IRAALPTIRY LSESGAKVIL 
VSHFGRPKGK PVESMRLTPV AERLSELLGR PVVKTTDAVG AGAEAQVAAT SNGQVVLLEN
VRFHAEEEAN DAEFAKALAS LADIYVNDAF GAAHRAHAST AGVTEYLSPC VAGYLLEKEL
QYLQAAIDNP QRPLAAIVGG SKVSSKIGVI ETLLDKCDKL LIGGGMIFTF YKAQGLSVGG
SLVEEDKLDL ARSLMAKAQE KGVQLLLPVD VVVADKFAPD ANAKTVAIDA IPDGWMGLDI
GPESVKQFEE ALADCRSVIW NGPMGVFEFD QFAVGTEAIA RSLAGLTRKG ATTIIGGGDS
VAAVEKVGVA SEMSHISTGG GASLELLEGK VLPGVAALDD AA