Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1115 |
Symbol | |
ID | 3775065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1132340 |
End bp | 1132720 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637799541 |
Product | hypothetical protein |
Protein accession | YP_400132 |
Protein GI | 81299924 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.198517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.698975 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAGA CAATTCTGTT TCCTGTCGAT CGCAGCCGCG AAGCCTGGGA GCCATCGCAG TTGGTCCTGG AGTTGGTGCA GCAATACAGC AGTCGCTTGG TGCTGCTGTC GGTGGTGGCC GATGATGCGG AGTCGGCAGC GGCTGGGGCA GAGCTGCTCG ACAAGGGGCG ATCGCTGTTT GAAGCCCAGG GTATTGTGCC GGAAATCGTC GAGCGTCAAG GCAATCCACC CTTCGCAATC TGTGACGTTG CCGATGAAGT GGGCGCTAGC CTAATCGTGA TGGGCTGTCG GGGCATTGGC CTGACTCCGG AAGGAGCGGC GGAAAGTGTC ACCAACCGAG TCATCAATCT TGCCCCCTGT CCCGTGTTAG TTGTGCCATG A
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Protein sequence | MFETILFPVD RSREAWEPSQ LVLELVQQYS SRLVLLSVVA DDAESAAAGA ELLDKGRSLF EAQGIVPEIV ERQGNPPFAI CDVADEVGAS LIVMGCRGIG LTPEGAAESV TNRVINLAPC PVLVVP
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