Gene Synpcc7942_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1115 
Symbol 
ID3775065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1132340 
End bp1132720 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content59% 
IMG OID637799541 
Producthypothetical protein 
Protein accessionYP_400132 
Protein GI81299924 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.198517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.698975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAGA CAATTCTGTT TCCTGTCGAT CGCAGCCGCG AAGCCTGGGA GCCATCGCAG 
TTGGTCCTGG AGTTGGTGCA GCAATACAGC AGTCGCTTGG TGCTGCTGTC GGTGGTGGCC
GATGATGCGG AGTCGGCAGC GGCTGGGGCA GAGCTGCTCG ACAAGGGGCG ATCGCTGTTT
GAAGCCCAGG GTATTGTGCC GGAAATCGTC GAGCGTCAAG GCAATCCACC CTTCGCAATC
TGTGACGTTG CCGATGAAGT GGGCGCTAGC CTAATCGTGA TGGGCTGTCG GGGCATTGGC
CTGACTCCGG AAGGAGCGGC GGAAAGTGTC ACCAACCGAG TCATCAATCT TGCCCCCTGT
CCCGTGTTAG TTGTGCCATG A
 
Protein sequence
MFETILFPVD RSREAWEPSQ LVLELVQQYS SRLVLLSVVA DDAESAAAGA ELLDKGRSLF 
EAQGIVPEIV ERQGNPPFAI CDVADEVGAS LIVMGCRGIG LTPEGAAESV TNRVINLAPC
PVLVVP