Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1114 |
Symbol | rbgA |
ID | 3775064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1131480 |
End bp | 1132343 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799540 |
Product | ribosomal biogenesis GTPase |
Protein accession | YP_400131 |
Protein GI | 81299923 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.44359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTC CGCAAATTCA GTGGTATCCC GGTCACATTG CCAAGGCTGA ACGCCAGCTG CAGGAACAGT TAAAACGGGT CGATGTGGTC TTGGAAGTCC GGGATGCGCG GATTCCCCTC GCGACCGATC ACCCGCGCCT GAAAAGCTGG CTGGGAAGTC GGGAGCGGTT GCTCATTCTT AACCGCTTGG ACATGATTCC AGCACCAGCA CGACAGGCTT GGATCGACTG GTTTCGCAGC CAAGGCGATC GCGTTTTATT GACTGATGCC CACGCGGGTA CTGGAGTGGC ACAGCTCTCG CAAGCAGCTC AGGCAGCAGG AGCAGCCATG AATGCTCGCC GCAAGCAACG GGGAATGCTT CCCCGCGCGG TACGCGCAGT GGTGATTGGC TTTCCCAACG TTGGCAAGTC GGCCCTGATC AATCGCTTGG TGAAGAAAAA AGTCGTTGAA AGTGCTCGTC GTGCTGGTGT GACGCGATCG CTGCGCTGGG TGCGGGTCAG TGAGCATTTG GATCTGCTAG ATGCCCCTGG AGTTCTGCCG AGTCGGCTAG ATGATCAAAC AGCAGCCCTA AAGTTGGCGC TCTGTGATGA CATTGGCGAA GCAGCCTACG ACAATCAACG GGTGGCAGCG GCTCTCGTCG ATTGCCTGCA AGCCCTGGAA GCACAGCCCC TCAGTGGCGT GACCCCAACC CTCTTCTTCG ATCGCTATGG ATTGTCGGTC GACGATACTG GCGAAGCCTA CCTCGCAGCC TTGGCCGATC ATCGTTGTCA GGGCGATCGC GAGCGAACAG CCCTGATGCT GCTCAATGAT TTTCGGCGGG GCAGCCTTGG TCCGATCGCC CTTGAACTTC CTCCAACGGC CTAA
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Protein sequence | MSAPQIQWYP GHIAKAERQL QEQLKRVDVV LEVRDARIPL ATDHPRLKSW LGSRERLLIL NRLDMIPAPA RQAWIDWFRS QGDRVLLTDA HAGTGVAQLS QAAQAAGAAM NARRKQRGML PRAVRAVVIG FPNVGKSALI NRLVKKKVVE SARRAGVTRS LRWVRVSEHL DLLDAPGVLP SRLDDQTAAL KLALCDDIGE AAYDNQRVAA ALVDCLQALE AQPLSGVTPT LFFDRYGLSV DDTGEAYLAA LADHRCQGDR ERTALMLLND FRRGSLGPIA LELPPTA
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