Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1113 |
Symbol | |
ID | 3775063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1130382 |
End bp | 1131473 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799539 |
Product | hypothetical protein |
Protein accession | YP_400130 |
Protein GI | 81299922 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0939063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA GCGATCGCCG CATTTCCCTC ACAACTGATA GCCTGCTGCT GATCGTGGGG CTGTCCCTCA TTCTGCTGAT GCTCTGGCAG TTGCGCGGCC TAATTTTGAT CCTGATGAGT GCGATCGTGT TGGCTGCCTC AATTGCGCCG ATCGTGAATC AGCTCGAGCA ATGGCGCTTG CCGCGTTGGT TAGGCGTGCT GGTCGCTTAT GGCGGCTTGC TGGCCATCCT GACGGGGGCG AGCCTGCTGG TGGGTCCCCT CGTGATCAGC CAAATTCAGA CCCTGTTACG GCAACTGCCC AACCTCGTTG AACGGGTAGA ACTCCTCTCG ATTGACATTG CCGAACAGCT CGATTTGCAA GACTCTCCGC TCTTGCCCCA GTTGGTCAAT CCTCAGGAGG TGGCAGGCTG GGTGATCAAC ACCTCGCAGC AGTTACTTCG TCAGTCCTAT GGCATCACCC GTGGCATCTT AGGTGGCTTC TTCAGCGTTG TGCTGGGTCT ACTCCTGTCC AGTTACTTAG TTGCTGACAG CAAAACGCTG GGGCGAGGCT TTGTGCGACT CTTTGCTGCC CCTTGGGACG ATCGCCTGGC TGCACTACTC GGCCCTGTCG GGCAGCGTAT GGGCGCTTAT ATTCGCGGAC GAGTGCTGGT GTCGTTGCTG TTGGGCATTG CGATCGCGCT AGGGTTGCGC ACCCTTGGAT TGGGCGACTA CGCCATTGGT CTGGGGGCGA TCGCAGGATT CACCAATCTG ATTCCCTTCC TTGGGCCTTT CCTAGGGGCC ATTCCGGCTC TGTTTGTGGC CCTAGCGCAG GGCGATAGCG CTTGGTTATT TCTCTGGGTT TTGCTGTTGT TTGTCATTAT TCAAAATCTA GAAAGCTATG TGCTCGATCC GCTGCTGGTG GGCGCTGCAG TCGGGATCCA TCCGCTCTAT CAGCTCTTGG CGGTATTGGG AGGGGTGCAA CTCCTGGGGA TCGTTGGAGC CGTGATTGCG CCCCCTTGGA TTGCTGGTGG CGCTCTTTTA CTCGAGCGGC TCTATCTCCA ACCCAAGGAC TTGGCCAAGC AAGGGCTGCC GTCTGAGGCA ACTCAGCCAT GA
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Protein sequence | MSESDRRISL TTDSLLLIVG LSLILLMLWQ LRGLILILMS AIVLAASIAP IVNQLEQWRL PRWLGVLVAY GGLLAILTGA SLLVGPLVIS QIQTLLRQLP NLVERVELLS IDIAEQLDLQ DSPLLPQLVN PQEVAGWVIN TSQQLLRQSY GITRGILGGF FSVVLGLLLS SYLVADSKTL GRGFVRLFAA PWDDRLAALL GPVGQRMGAY IRGRVLVSLL LGIAIALGLR TLGLGDYAIG LGAIAGFTNL IPFLGPFLGA IPALFVALAQ GDSAWLFLWV LLLFVIIQNL ESYVLDPLLV GAAVGIHPLY QLLAVLGGVQ LLGIVGAVIA PPWIAGGALL LERLYLQPKD LAKQGLPSEA TQP
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