Gene Synpcc7942_1113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1113 
Symbol 
ID3775063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1130382 
End bp1131473 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content58% 
IMG OID637799539 
Producthypothetical protein 
Protein accessionYP_400130 
Protein GI81299922 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0939063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA GCGATCGCCG CATTTCCCTC ACAACTGATA GCCTGCTGCT GATCGTGGGG 
CTGTCCCTCA TTCTGCTGAT GCTCTGGCAG TTGCGCGGCC TAATTTTGAT CCTGATGAGT
GCGATCGTGT TGGCTGCCTC AATTGCGCCG ATCGTGAATC AGCTCGAGCA ATGGCGCTTG
CCGCGTTGGT TAGGCGTGCT GGTCGCTTAT GGCGGCTTGC TGGCCATCCT GACGGGGGCG
AGCCTGCTGG TGGGTCCCCT CGTGATCAGC CAAATTCAGA CCCTGTTACG GCAACTGCCC
AACCTCGTTG AACGGGTAGA ACTCCTCTCG ATTGACATTG CCGAACAGCT CGATTTGCAA
GACTCTCCGC TCTTGCCCCA GTTGGTCAAT CCTCAGGAGG TGGCAGGCTG GGTGATCAAC
ACCTCGCAGC AGTTACTTCG TCAGTCCTAT GGCATCACCC GTGGCATCTT AGGTGGCTTC
TTCAGCGTTG TGCTGGGTCT ACTCCTGTCC AGTTACTTAG TTGCTGACAG CAAAACGCTG
GGGCGAGGCT TTGTGCGACT CTTTGCTGCC CCTTGGGACG ATCGCCTGGC TGCACTACTC
GGCCCTGTCG GGCAGCGTAT GGGCGCTTAT ATTCGCGGAC GAGTGCTGGT GTCGTTGCTG
TTGGGCATTG CGATCGCGCT AGGGTTGCGC ACCCTTGGAT TGGGCGACTA CGCCATTGGT
CTGGGGGCGA TCGCAGGATT CACCAATCTG ATTCCCTTCC TTGGGCCTTT CCTAGGGGCC
ATTCCGGCTC TGTTTGTGGC CCTAGCGCAG GGCGATAGCG CTTGGTTATT TCTCTGGGTT
TTGCTGTTGT TTGTCATTAT TCAAAATCTA GAAAGCTATG TGCTCGATCC GCTGCTGGTG
GGCGCTGCAG TCGGGATCCA TCCGCTCTAT CAGCTCTTGG CGGTATTGGG AGGGGTGCAA
CTCCTGGGGA TCGTTGGAGC CGTGATTGCG CCCCCTTGGA TTGCTGGTGG CGCTCTTTTA
CTCGAGCGGC TCTATCTCCA ACCCAAGGAC TTGGCCAAGC AAGGGCTGCC GTCTGAGGCA
ACTCAGCCAT GA
 
Protein sequence
MSESDRRISL TTDSLLLIVG LSLILLMLWQ LRGLILILMS AIVLAASIAP IVNQLEQWRL 
PRWLGVLVAY GGLLAILTGA SLLVGPLVIS QIQTLLRQLP NLVERVELLS IDIAEQLDLQ
DSPLLPQLVN PQEVAGWVIN TSQQLLRQSY GITRGILGGF FSVVLGLLLS SYLVADSKTL
GRGFVRLFAA PWDDRLAALL GPVGQRMGAY IRGRVLVSLL LGIAIALGLR TLGLGDYAIG
LGAIAGFTNL IPFLGPFLGA IPALFVALAQ GDSAWLFLWV LLLFVIIQNL ESYVLDPLLV
GAAVGIHPLY QLLAVLGGVQ LLGIVGAVIA PPWIAGGALL LERLYLQPKD LAKQGLPSEA
TQP