Gene Synpcc7942_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1104 
Symbol 
ID3775054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1121152 
End bp1122417 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content57% 
IMG OID637799530 
Productcell division protein FtsW 
Protein accessionYP_400121 
Protein GI81299913 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.921577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.914762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCTC GTGGCTTGCG GTTTGGGCAG TGGCGTCAAA AGTTTGCCTT CCTTGATGCC 
TGGAAGGGCA TGGATCGCTG GCTGCTGTTC ATTCCGATTG CCCTGACCCT GTTGGGCGGC
TTGCTGATCC GCAGCACTCA AGCCAACCAA AACTTTGCCG ATTGGTGGCA GCACTGGATT
ACCGGGGCAG TGGGGGTAGG ACTGGCGCTG GCGATCGCTC GCTGGCGCTA TGACAACTGG
CTGAAGCTGC AATGGTGGCT CTATGGGGTC ACCTGTCTCT CACTGATTGC GGTGCGTTTT
GTCGGCACCA CAGCCCTAGG GGCTGAACGC TGGATCAGCA TTGGCGGCTT TAACATCCAG
CCCTCGGAAT TTGCCAAACC GCTGATGATT GTAGTGCTGG CAGCCATTCT GAGCCGTGAA
ACGGCCGATC GCTTGCCGGG GCTGATCAAA GCGATCGCGA TTATGTCGGT GCCTTGGCTA
CTGATCTTCC TGCAGCCCAA CCTCGGAACT TCACTGATCT TTGGAGCGAT CGTGTTTGGC
ATGCTCTATT GGGCCAATGC CAAACCGGGC TGGCTATTGC TGATGCTCTC GCCCTTGCCC
TCAGCCATCT TGTTTGAGGC GCTGCCTTGG GCCTGGCCCG TCTGGCTGGC GATCGTGACT
TCCGTTGGCT GGAAGAGTTT TGCGTGGCGC TGGCGCGGTG CGATTGGAGC ACTGCTGACC
AATGTGGCCA GTGGTGTGGT GGCGGGTTGG GCTTGGCAAA ACCTTCTGCA GGACTACCAA
AAAGACCGCC TGATTCTCTT CCTCGATCCC AATAAAGATC CACTGGGTGG GGGCTACAAC
CTGATCCAAG CCCGGATCGC GATCGGGGCC GGAGGAATTT GGGGCCAAGG GCTCAATCAA
GGTACTCAGA CGCAGCTGCG CTTTATTCCC GAGCAGCACA CAGACTTCAT TTTTTCGGCT
GTGGGCGAAG AGTTGGGGTT TGTCGGCTCG ATCGCCGTCA TCCTGCTGTT TTGGCTAGTT
TGCTGGCGGC TGATTGCGAT CGCCACCAGT GCCCGCGATA ACTTTGGTTC GTTGTTGGCG
ATCGGCGTTT TGTCGATGCT GGTTTTTCAG ATCGTGATCA ACATTGCCAT GACAATTGGC
CTTGGCCCCG TCACCGGGAT TCCCTTGCCT TGGCTCAGTT ATGGACGATC GGCCCTACTG
GCTAATTTCA TTGCGATCGG AATTGTCGAA TCGGTCTGGC GCTTTCGGCA GATCAGCCGC
TACTGA
 
Protein sequence
MLARGLRFGQ WRQKFAFLDA WKGMDRWLLF IPIALTLLGG LLIRSTQANQ NFADWWQHWI 
TGAVGVGLAL AIARWRYDNW LKLQWWLYGV TCLSLIAVRF VGTTALGAER WISIGGFNIQ
PSEFAKPLMI VVLAAILSRE TADRLPGLIK AIAIMSVPWL LIFLQPNLGT SLIFGAIVFG
MLYWANAKPG WLLLMLSPLP SAILFEALPW AWPVWLAIVT SVGWKSFAWR WRGAIGALLT
NVASGVVAGW AWQNLLQDYQ KDRLILFLDP NKDPLGGGYN LIQARIAIGA GGIWGQGLNQ
GTQTQLRFIP EQHTDFIFSA VGEELGFVGS IAVILLFWLV CWRLIAIATS ARDNFGSLLA
IGVLSMLVFQ IVINIAMTIG LGPVTGIPLP WLSYGRSALL ANFIAIGIVE SVWRFRQISR
Y