| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1099 |
|---|
| Symbol | ubiE |
|---|
| ID | 3775049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 1116261 |
|---|
| End bp | 1116962 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637799525 |
|---|
| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
|---|
| Protein accession | YP_400116 |
|---|
| Protein GI | 81299908 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.729785 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0384798 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTGC TGGCTCCCGA TGCGGTGGAA GGGCTATTCG ATCAGATTGC GCCGATTTAC
GACAATCTGA ATGATCAGCT CAGCTTTGGC CTGCATCGCC TCTGGAAGCG CATGGCCGTC
AAATGGTCTG CCGCAAAACC CGGCGATCGC GTTTTGGATC TCTGCTGCGG CAGTGGCGAT
CTGGCTTTTT TGCTAGCAAA AGTAGTCGGG AGCAAGGGGC AAGTCATTGG TTTCGATCGC
TCGCAGGCGC TTCTGTCTGT TGCAGGCGAT CGCGCTCGCC AGCTTGCTAG CGCACTGGTG
ATCGACTGGC AGCGGGGCGA TGCCCTCGAC CTACCTTTTC CAGATGATCA CTTTGATGCA
GCGACCTTAG GCTATGGCCT GCGCAATGTA CCGGATATCC CTACGGTTTT GCGGCAGTTG
CAACGGGTGT TGAAGCCGGG GGCTAGGGCA GCGATCCTCG ATATGCACCG CCCCTACTCA
CCGCTGTTAC GGCAGTTTCA GCAGGTTTAT CTTGATCGCT GGGTTGTACC GGCTGCCGCC
GCCCAAAACT GTGCTGCTGA GTACGAGTAC ATCGATGCCA GCCTAGAGGC ATTTCCCCAG
GGTCAGCAGC AGGTGGCATT AGCGATCGCA GCGGGTTTTC AGCGGGCCAA GCACTACGAA
CTGGCAGCAG GGCTGATGGG TGTGTTGGTG GTTGAGGCGT AA
|
|---|
| Protein sequence | MSVLAPDAVE GLFDQIAPIY DNLNDQLSFG LHRLWKRMAV KWSAAKPGDR VLDLCCGSGD
LAFLLAKVVG SKGQVIGFDR SQALLSVAGD RARQLASALV IDWQRGDALD LPFPDDHFDA
ATLGYGLRNV PDIPTVLRQL QRVLKPGARA AILDMHRPYS PLLRQFQQVY LDRWVVPAAA
AQNCAAEYEY IDASLEAFPQ GQQQVALAIA AGFQRAKHYE LAAGLMGVLV VEA
|
|---|
| |