| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1086 |
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| Symbol | hemE |
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| ID | 3775036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1102104 |
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| End bp | 1103168 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799512 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_400103 |
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| Protein GI | 81299895 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000970328 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCGCGT CGTCTTCGCT CCCCCGACTT TTGCGCGCTG CCCGTGGCGA GGTTCTCGAT
CGCCCACCCG TGTGGATGAT GCGCCAAGCT GGTCGCTACA TGAAGGTCTA TCGCGATCTG
CGGGACAAGT ACCCTGGCTT CCGTGAGCGT TCGGAAACGC CGGAACTGGC GATCGAAATT
TCGCTGCAAC CGTTCCGCGC TTTCAAGCCC GACGGCGTCA TCCTGTTCTC GGATATCCTG
ACGCCCTTGC CGGGCATGGG CATTCCCTTC GACATCATTG AGAGCAAAGG CCCGATTCTG
GAGCCGCCGA TCCGCACGGC TGAACAAGTG GCAGCAGTGC ATGATCTCGA TCCGGAAGAA
GCCACGCCTT TCATTCGTCC AATTTTGGAA ACCCTTCGTC AGGAAGTCGG CAACGAAGCC
GCCGTGCTAG GGTTTGCCGG TGCGCCATGG ACTCTCGCGG CCTATGCGAT CGAAGGTAAA
AGCTCGAAAA CCTACGCCAA CATCAAGCAC CTTGCCTTTT CGGAACCGAC GATCCTGCAT
GAGTTGTTGG GCAAGCTAGC CGACAACATT GCCATCTACC TCTGCCACCA AATTGACTGT
GGTGCGCAGG TTGTTCAGCT GTTCGATTCT TGGGCCGGTC AGCTGAGCCC GATCGATTAC
GACACCTTCG CTCTGCCTTA TCAGCAGCGT GTCTTCCAGC AAGTGAAGGC AAAACACCCT
GAAGTGCCCT TAATTCTCTA CATCAGCGGT AGTGCTGGCG TACTGGAGCG GATGGGCCAG
TCGGGCTGCG ATATCGTCAG CGTCGATTGG ACGGTTGATT TGCTCGATGC TCGCCGCCGC
TTGGGTCCGG ATATCGGCCT GCAAGGCAAC ATCGATCCGG GTGTGCTGTT TGGCTCTCAA
GATTTCATCC GCGATCGCAT TTTGGACACG GTGCGTAAAG CTGGCAATCA GCGGCACATT
CTCAACTTGG GCCACGGCAT CCTGCCCGGG ACTCCTGAGG ATAATGCCCG TCACTTCTTT
GAGACGGCCA AAAACCTCGA TCAACTCTTG GCAGCGAGTC ACTAA
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| Protein sequence | MVASSSLPRL LRAARGEVLD RPPVWMMRQA GRYMKVYRDL RDKYPGFRER SETPELAIEI
SLQPFRAFKP DGVILFSDIL TPLPGMGIPF DIIESKGPIL EPPIRTAEQV AAVHDLDPEE
ATPFIRPILE TLRQEVGNEA AVLGFAGAPW TLAAYAIEGK SSKTYANIKH LAFSEPTILH
ELLGKLADNI AIYLCHQIDC GAQVVQLFDS WAGQLSPIDY DTFALPYQQR VFQQVKAKHP
EVPLILYISG SAGVLERMGQ SGCDIVSVDW TVDLLDARRR LGPDIGLQGN IDPGVLFGSQ
DFIRDRILDT VRKAGNQRHI LNLGHGILPG TPEDNARHFF ETAKNLDQLL AASH
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