Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1082 |
Symbol | |
ID | 3775032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1094751 |
End bp | 1097516 |
Gene Length | 2766 bp |
Protein Length | 921 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799508 |
Product | ATPase, E1-E2 type |
Protein accession | YP_400099 |
Protein GI | 81299891 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase [TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0000813733 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCAGCCT CGTTGACTGA TGTTCGCCAG CCGATCGCTC ACTGGCATAG TTTGACCGTT GAGGAATGTC ATCAACAGCT CGATGCTCAT CGAAATGGCT TAACTGCTGA AGTTGCTGCC GATCGCCTAG CGCTGTATGG CCCCAATGAA TTGGTGGAGC AAGCAGGCCG CAGCCCATTG CAGATTCTGT GGGACCAGTT CGCCAACATC ATGTTGTTGA TGCTGCTAGC GGTGGCTGTA GTCTCTGGAG CGCTAGACCT GAGAGATGGC CAATTTCCCA AGGATGCGAT CGCAATTTTG GTGATCGTGG TTCTGAATGC GGTGCTGGGT TATCTGCAAG AAAGCCGCGC TGAGAAGGCG TTGGCTGCAC TCAAAGGCAT GGCGGCTCCT TTGGTTCGGG TGCGGCGCGA CAATCGCGAT CAGGAAATCC CCGTCGCAGG CTTAGTACCC GGTGATCTGA TCCTGTTGGA GGCAGGCGAC CAAGTACCGG CAGACGCGCG CTTGGTCGAA AGTGCCAACT TGCAGGTGAA AGAGTCGGCG CTAACTGGCG AGGCCGAAGC GGTGCAGAAG CTGGCGGATC AGCAATTGCC GACCGATGTG GTGATTGGCG ATCGCACGAA CTGTCTGTTT CAAGGGACGG AAGTCCTGCA GGGCCGTGGT CAGGCTTTGG TCTATGCCAC GGGCATGAAC ACAGAGCTGG GGCGGATTGC GACGTTGCTC CAAAGTGTAG AGAGTGAAAA GACGCCGCTT CAGCAGCGCT TGGACAAGTT GGGCAATGTA CTGGTCAGCG GCGCTTTGAT CCTGGTGGCG ATTGTCGTTG GTTTGGGGGT GCTGAATGGT CAGTCTTGGG AGGATTTGCT CTCCGTTGGC CTGAGCATGG CAGTGGCGAT CGTGCCAGAA GGGCTACCCG CTGTGATCAC CGTGGCACTG GCGATCGGGA CTCAGCGCAT GGTGCAACGC GAAAGTTTGA TTCGGCGCTT ACCCGCCGTG GAAACGCTTG GCTCAGTCAC AACCATCTGT TCCGATAAGA CCGGCACGCT GACCCAAAAC AAGATGGTGG TGCAGCAGAT CCATACTCTC GACCACGATT TCACGGTGAC GGGCGAGGGC TATGTGCCAG CGGGCCATTT TTTGATTGGG GGTGAAATTA TTGTCCCGAA CGACTATCGC GACCTGATGC TGTTGTTGGC CGCGGGAGCG GTCTGCAATG ATGCAGCGTT GGTGGCCAGC GGCGAGCACT GGAGCATTGT GGGCGATCCC ACGGAAGGTT CGCTGCTGAC CGTGGCTGCG AAGGCAGGAA TTGACCCGGA AGGACTACAG CGGGTGCTAC CACGCCAGGA TGAGATCCCC TTCACCTCTG AGCGGAAGCG CATGAGTGTG GTGGTGGCTG ATCTGGGAGA GACGACCCTA ACGATTCGGG AAGGGCAACC CTACGTCCTC TTCGTCAAAG GTTCAGCGGA GCTGATCTTA GAACGCTGTC AGCATTGCTT TGGTAATGCC CAGCTTGAGT CACTCACTGC CGCTACACGC CAGCAGATCT TGGCAGCAGG AGAAGCCATG GCCAGCGCAG GAATGCGCGT TTTGGGGTTT GCCTACCGTC CCTCGGCGAT CGCGGATGTG GATGAGGATG CCGAGACAGA TCTGACTTGG CTGGGCTTGA TGGGTCAGAT TGATGCGCCG CGCCCAGAAG TCCGAGAGGC GGTCCAGCGC TGTCGGCAAG CCGGCATTCG CACACTGATG ATCACTGGCG ATCACCCGCT CACTGCTCAG GCGATCGCCC GGGATTTAGG CATCACGGAA GTGGGCCATC CCGTTCTGAC GGGGCAACAA CTCTCAGCCA TGAATGGGGC TGAACTCGAT GCCGCTGTGC GATCGGTGGA AGTTTATGCT CGAGTGGCTC CTGAGCACAA ACTGCGGATC GTTGAGTCGC TCCAACGCCA AGGGGAATTT GTTGCCATGA CCGGCGACGG CGTCAATGAC GCCCCCGCCC TGAAGCAGGC CAATATCGGT GTGGCGATGG GAATTACGGG CACCGATGTC AGCAAAGAAG CCAGCGATAT GGTTCTGCTG GACGATAACT TTGCCACTAT TGTGGCGGCA GTGGAAGAAG GCCGCATTGT CTACGGCAAC ATTCGCAAAT TTATTAAGTA CATTCTCGGC AGCAACATCG GCGAGCTGTT AACGATCGCT AGCGCCCCGC TTTTAGGTTT GGGCGCGGTT CCCCTAACAC CCCTGCAAAT CCTCTGGATG AACCTGGTCA CGGATGGCAT TCCCGCTTTG GCTTTGGCAG TTGAGCCCGG CGACCCAACG ATCATGCAGC GCCGGCCTCA CAATCCGCAA GAGAGTATTT TTGCGCGGGG ACTGGGCACT TACATGCTGC GGGTCGGGGT TGTCTTCTCG GCCTTCACGA TTGTGCTGAT GGTGATTGCT TACCAATACA CGCAGGTTCC GTTACCGGGG CTAGATCCGA AGCGCTGGCA AACGATGGTG TTTACGACGT TGTGCTTGGC CCAGATGGGA CATGCGATCG CAGTGCGCAG TGATCTCTTA ACCATCCAAA CACCGATGCG AACGAACCCT TGGCTCTGGC TCTCGGTCAT TGTGACGGCG TTGCTCCAGC TTGCTCTGGT TTATGTATCC CCGCTTCAGA AGTTCTTTGG CACCCATAGC CTCAGCCAGC TCGATCTGGC GATTTGTCTG GGCTTCAGTC TCCTGCTCTT TGTGTACCTC GAAGCTGAAA AGTGGGTGCG CCAGCGTCGG TATTGA
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Protein sequence | MSASLTDVRQ PIAHWHSLTV EECHQQLDAH RNGLTAEVAA DRLALYGPNE LVEQAGRSPL QILWDQFANI MLLMLLAVAV VSGALDLRDG QFPKDAIAIL VIVVLNAVLG YLQESRAEKA LAALKGMAAP LVRVRRDNRD QEIPVAGLVP GDLILLEAGD QVPADARLVE SANLQVKESA LTGEAEAVQK LADQQLPTDV VIGDRTNCLF QGTEVLQGRG QALVYATGMN TELGRIATLL QSVESEKTPL QQRLDKLGNV LVSGALILVA IVVGLGVLNG QSWEDLLSVG LSMAVAIVPE GLPAVITVAL AIGTQRMVQR ESLIRRLPAV ETLGSVTTIC SDKTGTLTQN KMVVQQIHTL DHDFTVTGEG YVPAGHFLIG GEIIVPNDYR DLMLLLAAGA VCNDAALVAS GEHWSIVGDP TEGSLLTVAA KAGIDPEGLQ RVLPRQDEIP FTSERKRMSV VVADLGETTL TIREGQPYVL FVKGSAELIL ERCQHCFGNA QLESLTAATR QQILAAGEAM ASAGMRVLGF AYRPSAIADV DEDAETDLTW LGLMGQIDAP RPEVREAVQR CRQAGIRTLM ITGDHPLTAQ AIARDLGITE VGHPVLTGQQ LSAMNGAELD AAVRSVEVYA RVAPEHKLRI VESLQRQGEF VAMTGDGVND APALKQANIG VAMGITGTDV SKEASDMVLL DDNFATIVAA VEEGRIVYGN IRKFIKYILG SNIGELLTIA SAPLLGLGAV PLTPLQILWM NLVTDGIPAL ALAVEPGDPT IMQRRPHNPQ ESIFARGLGT YMLRVGVVFS AFTIVLMVIA YQYTQVPLPG LDPKRWQTMV FTTLCLAQMG HAIAVRSDLL TIQTPMRTNP WLWLSVIVTA LLQLALVYVS PLQKFFGTHS LSQLDLAICL GFSLLLFVYL EAEKWVRQRR Y
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