Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1080 |
Symbol | |
ID | 3775029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1091781 |
End bp | 1093124 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637799505 |
Product | K+ transporter Trk |
Protein accession | YP_400097 |
Protein GI | 81299889 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00642094 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAAGGT CTTGGCGACT GACAGTGCCT AGGACAATTA GTCTAGGTTT TCTGGCAGTT ATTTTGGCAG GCACATTTTT GTTGATGTTG CCATGGTCAC AATCAAGCGG GCAGTGGGGC GGGTGGCTGC CTGCTCTGTT CACCTCAACT TCTGCAGTCT GTGTAACGGG ACTATCGGTT GTTGATGTTG GGACCTACTT TTCTCCCTTT GGTCAATTAG TTCTGATCCT GCTCATTCAA GTCGGTGGAT TAGGCTATAT GACTGCTACA ACTTTTCTGC TGATGCTACT GGGACTGCGC TTTGGTCTAC GCGATAAAGT TGCTATTCAG CAGTCTCTCG ATCGATCAGG CATGGCTCAA ATTCGGCAGG TTCTCAGAGC GATTGCGATC GCAACATTAG CTTGTGAAAC TGTTGGAGCG ATCGCTCTTT TTACCCCGCT CATGTCACGC CATGAGACAT TGATGGGAGC AGCGTGGTCG GCAATCTTCC ATAGTGTAAG TGCATTCAAC AATGCTGGCT TCAGCATCTA TCCTGATAAC CTAGTTGGAT TTGTCGGATC TCTTCGGGTC AATTGGATCA TCGCGATTCT AATTGTTCTT GGAGGGATTG GTTATCCTGT TATTTTAGAA GGCTGGCAGT TGTTAAAAGG CAAACGGCGC TTATCACCTC TTAGCCTGCA TTTTCGTTTG GCTATTCTCA CTACCTTGGG ATTGTTGATA GGAGGTTGGC TCCTGTTTCT TGGTGCTGAA CATTTGAATC CCAAAACGTT GGGCCCTCTA CCGATTAACG ATCAAATGCT CGCGGCTTGG TTTCAAACCG TGACACCCCG TACAGCAGGA TTTAACACCA TTGATCAAAC TCAAATGAGT TTATTTGCAC AGATGGTGAC GATCGCTCTC ATGTTCATAG GTGCAAGTCC TGGTGGGACA GGGGGCGGTG TGAAAACAAC GGCTCTAGCT ATCTTGATTG GCTGTACAAT TTCAGTCCTG CGAGGTCGTG AGTCAGTTCT AATGTTTCAA CGGCAAATTC CTCAGAGGAT TGTTCAAAAA GCAACAGCAG TCGTGGTTGG CTCTTCCTTT ACAATTATTT TGGGAACGCT AATCATGGCA GTTTTTGATC GGGACTTGGA ATTTATTCAA CTTCTCTTCG AGGCAGTTTC TGCATTTGCA ACAGTCGGCC TTGATCTGGG AGTGACAGCG ACAGCCAATG CAGGTGTTCA ACTCGTTTTA ATTGCTTTAA TGTACATCGG CAGGGTTGGA ATCTTACTAC TCATGCAAGC TTTGCTTGGA GATCCCCACC GATCGCGTCT GCGTTATCCC GAAGAAGAAT TACTCGTTGG TTAA
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Protein sequence | MQRSWRLTVP RTISLGFLAV ILAGTFLLML PWSQSSGQWG GWLPALFTST SAVCVTGLSV VDVGTYFSPF GQLVLILLIQ VGGLGYMTAT TFLLMLLGLR FGLRDKVAIQ QSLDRSGMAQ IRQVLRAIAI ATLACETVGA IALFTPLMSR HETLMGAAWS AIFHSVSAFN NAGFSIYPDN LVGFVGSLRV NWIIAILIVL GGIGYPVILE GWQLLKGKRR LSPLSLHFRL AILTTLGLLI GGWLLFLGAE HLNPKTLGPL PINDQMLAAW FQTVTPRTAG FNTIDQTQMS LFAQMVTIAL MFIGASPGGT GGGVKTTALA ILIGCTISVL RGRESVLMFQ RQIPQRIVQK ATAVVVGSSF TIILGTLIMA VFDRDLEFIQ LLFEAVSAFA TVGLDLGVTA TANAGVQLVL IALMYIGRVG ILLLMQALLG DPHRSRLRYP EEELLVG
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