Gene Synpcc7942_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1077 
Symbol 
ID3775026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1087327 
End bp1087638 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content56% 
IMG OID637799502 
Producthypothetical protein 
Protein accessionYP_400094 
Protein GI81299886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.351072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000889304 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGGAA AAGAACTGCA TCAGCTCTTG CTCGATCGCT GGGGCTATTC CTACGGCCTG 
CAGCTACGAC GTACCCAGGG CAAAATCTTC CTGCAGATTA TGTGGAAGTA CCTAGAGCAG
GCCTCCTTTC CCATGGATGA AGGGGAGTAT TTTTCTCACC TAGATGAGGT CGCGAGCTAC
CTCGTCGCCC TAGGGGCTGC TGAGGCGATC GCCCAAACCA TTCGCGAAAC CCGCGAAAAA
CCTCGCTTGG GGAAGGCGGT TAGCATTCCG ATTGAATTGG GCGCTCGGGC CAGTGAGTGG
TTCCCGGACT GA
 
Protein sequence
MTGKELHQLL LDRWGYSYGL QLRRTQGKIF LQIMWKYLEQ ASFPMDEGEY FSHLDEVASY 
LVALGAAEAI AQTIRETREK PRLGKAVSIP IELGARASEW FPD