| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1068 |
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| Symbol | |
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| ID | 3774000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1079478 |
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| End bp | 1080773 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637799492 |
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| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
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| Protein accession | YP_400085 |
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| Protein GI | 81299877 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0808214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00512837 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCACG AAGTCTTCAT GCCCGCCCTC AGCTCCACTA TGACCGAGGG CAAGATCGTC
GAGTGGGTGA AGGCTCCGGG CGATCGTGTC GAGAAAGGTG AAACAGTCCT GATCGTCGAG
TCGGACAAAG CCGACATGGA CGTGGAATCT TTCTATGAAG GCTACCTCGC GACGATTATT
GTGCCGGCAG GCGGCAATGC TCCCGTGGGC GAAGCGATCG CTCTGATTGC AGAAACTGAA
GCCGAAATTG AAGTTGCGAA GCAACAGGCA GCCGGTGCTG GTTCCGCTGC AGCGACCCCT
GCAACCCCTG CTGCTACGGC GGCACCCGAA CCCGTCGCTG TGAGCCCTGA ACCTGTCGCT
GCTCCTACAG CAACCCGCAG CGATCGCTTG GTTGCCTCCC CGCGTGCCAA AAAACTCGCC
AAGAGCTTGG GCGTTGACCT CGCTAGCCTT ACCGGCAGTG GTCCCCACGG TCGAATTGTG
GCAGCCGATG TCGAAGCCGC CGCAGGAGTT ACTGCCAAAC CCGCGATCGC TACCCCTGTG
GCTCCTGCCG TTGTCACCGC ACCGGTTGCT GCTCCCGTTG CTACGGCTCC TGCTGCCCCC
GCGCCAACTC CCGCGATCGC GCCGGGTCAG TTCGTGCCCT ACAGCACCTT CCAGCAGGCC
GTGGTTCGCA ACATGGAAGC GAGCCTCAAC GTGCCGGTCT TCCGCGTCGG TTACACGATC
ACCACCGATG CGATCGATAG TTTGGCCAAG CAGCTCAAGC CCAAAGGCGT GACAATCACG
GTTTTGCTGG CCAAAGCCGT CGCTGCAACC CTCGCCAAGC ATCCCTTGCT CAATGCTCGG
GCGACAGAAA CTGGCGTCCA GTACAACGAA GCCATCAACG TGGCGATCGC GGTGGCTATG
GATGATGGCG GTCTGCTGAC CCCCGTACTG GGTCGTGCTG ATCAAACCGA TCTCTATAGC
TTGGCTCGCA ACTGGAAGGA TCTCGTGGCG CGATCGCGCA CCAAGCAACT CAAACCCGAG
GAATACACCA CCGGCACCTT TACCCTCTCC AATCTAGGGA TGTTTGGTGT CGATCGCTTC
GATGCGATTC TGCCGCCGGG CACCGGTGCG ATTCTGGCGA TTGGGGCTTC CAAACCGACC
CTCGTGGCCA CGGCTGACGG TCTGTTTGGC GTCAAGCGGC AGATGCAAGT TAACCTCACC
TGTGATCACC GCCACATCTA CGGCGCTCAT GCGGCTGCCT TCCTCAAGGA CTTGGCCGAC
CTGATTGAAA ACCGCCCCGA AAGCCTGACC CTCTAA
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| Protein sequence | MIHEVFMPAL SSTMTEGKIV EWVKAPGDRV EKGETVLIVE SDKADMDVES FYEGYLATII
VPAGGNAPVG EAIALIAETE AEIEVAKQQA AGAGSAAATP ATPAATAAPE PVAVSPEPVA
APTATRSDRL VASPRAKKLA KSLGVDLASL TGSGPHGRIV AADVEAAAGV TAKPAIATPV
APAVVTAPVA APVATAPAAP APTPAIAPGQ FVPYSTFQQA VVRNMEASLN VPVFRVGYTI
TTDAIDSLAK QLKPKGVTIT VLLAKAVAAT LAKHPLLNAR ATETGVQYNE AINVAIAVAM
DDGGLLTPVL GRADQTDLYS LARNWKDLVA RSRTKQLKPE EYTTGTFTLS NLGMFGVDRF
DAILPPGTGA ILAIGASKPT LVATADGLFG VKRQMQVNLT CDHRHIYGAH AAAFLKDLAD
LIENRPESLT L
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