| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1067 |
|---|
| Symbol | |
|---|
| ID | 3773999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1078734 |
|---|
| End bp | 1079282 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637799491 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_400084 |
|---|
| Protein GI | 81299876 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0659458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00674317 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACACCCA ACTTTGACCC CACACAAGTG GCGACCGCCG CACAAGCTCT GGTCTTGCAA
ATGATGGCCG AACGGGGCCG CGGTGTCGTC CTTGTTGGTG CTGCCCGTTT AGATCTGGCC
CTCGAACGCC TGTTGCAATC CGTCATGGCT CCCCTTGGCG ATGAAGAAGA CGTTCTCTTC
ACCCCCGATC GCTCCCTGGG CAGCTTTGCC GCCAAGATTA CTCTCGCAGC TCGGCTCGGC
TTACTGGATC CCACAGTCGA GAAAGCCCTG CATGGCATTC GGGCCGTTCG CAATGACTTT
GCCCACAGTG CCAGTGACAC CAACCTGAGC GAAGCCCGCC ACCAAAAGCG CCTCGCCAAG
TCCTATCAAG CTGCTCGCCG AAATCCGCTC TGGCTACCGC TGGAGCAAGT CTTCGATGAG
CACAATGTGG CGATTGGCAC CAGCGATCGC GAATTCATTT TGCTGGTGAC CATTTTGGCT
GCCTTTATCG ATGCCTGCAC CTCACTGCAA ACCCCCTTCC GTCCGCGAGC CACCGTCCGC
TTTCACTAA
|
|---|
| Protein sequence | MTPNFDPTQV ATAAQALVLQ MMAERGRGVV LVGAARLDLA LERLLQSVMA PLGDEEDVLF
TPDRSLGSFA AKITLAARLG LLDPTVEKAL HGIRAVRNDF AHSASDTNLS EARHQKRLAK
SYQAARRNPL WLPLEQVFDE HNVAIGTSDR EFILLVTILA AFIDACTSLQ TPFRPRATVR
FH
|
|---|
| |