| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1054 |
|---|
| Symbol | |
|---|
| ID | 3773984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 1065228 |
|---|
| End bp | 1066049 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637799476 |
|---|
| Product | HEAT repeat-containing PBS lyase |
|---|
| Protein accession | YP_400071 |
|---|
| Protein GI | 81299863 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.230439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0412138 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAG CGGGGACGCC AGCTGAGGCG CTGACCTACG AACAAGCGAT CGCGAATCTC
CGACAGACAG CAGATACGGG CGATCGCTAC TACGCAGCTT GGTGGCTGGG TCGGTTTCGG
ATGAAGCAGC CAGAGGCGAT CGCGCTGTTG ATTGAAGCCT TAGATGATAG CCTCGATCGC
GCACCTGATG GCGGCTATCC CCTACGGCGC AATGCCGCAC GCGCATTGGG AAAACTGGAA
AGTCCTGAGG CGATCGCACC GTTGATTGCC TGCTTGCAGT GCGAGGACTA CTACGTTCGC
GAGGCTGCAA CCCAGTCCTT AGGTGAGTTG CAAGCCACAG TTGCGGTTCC AGCGTTATTG
AAACTGTTAG AGGGCGGACC TGAGGCGATC GCCGCGATTC CGGGTAAACC CCATCTGACT
CAGCCAGCGG ATGCGGTGAT GGAAACCCTG GGACAACTGC GAGCAACGGT TGCTGTCCCT
GTGGTGCAAG CGTTTCTGGA GCATCCGATC GATAAAATTC GCCTAGCAGC CGCACGATCG
CTCTATCAGC TCACCGGCGA CGATCACTAT GCTGAGCGGG TTGTTCAAGG TTTGAGTGAC
CCGAAATTAC AGCGCCGGCG GTCGGCCCTG ATGGATTTAG GGGCGATCGG CTATTTGCCC
GCTGCACCGC AAATTGCCCA GACGCTTGCC GAGAATAGTC TCAAACTGAT CTCGCTCAAA
GGGCTGCTCG ATACTCATCT GCGGCAACAG ACCCCCGAGG CGATCGCAGA GTTGGATGAG
TCGGCAATCG CGCTGATGGA TTTGATGGAT GGTTTGCTGT AG
|
|---|
| Protein sequence | MSEAGTPAEA LTYEQAIANL RQTADTGDRY YAAWWLGRFR MKQPEAIALL IEALDDSLDR
APDGGYPLRR NAARALGKLE SPEAIAPLIA CLQCEDYYVR EAATQSLGEL QATVAVPALL
KLLEGGPEAI AAIPGKPHLT QPADAVMETL GQLRATVAVP VVQAFLEHPI DKIRLAAARS
LYQLTGDDHY AERVVQGLSD PKLQRRRSAL MDLGAIGYLP AAPQIAQTLA ENSLKLISLK
GLLDTHLRQQ TPEAIAELDE SAIALMDLMD GLL
|
|---|
| |