Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1052 |
Symbol | |
ID | 3773982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1064073 |
End bp | 1064594 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799474 |
Product | phycocyanin, beta subunit |
Protein accession | YP_400069 |
Protein GI | 81299861 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01339] phycocyanin, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0614393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTTTG ATGCTTTCAC CAAGGTGGTG GCACAAGCCG ATGCCCGTGG CGAATTTTTG AGCGACGCCC AACTGGACGC GCTGAGCCGC TTGGTTGCAG AAGGCAACAA ACGGATTGAT ACGGTCAACC GCATCACCGG TAATGCTTCG TCGATCGTCG CTAACGCAGC GCGTGCATTG TTTGCAGAGC AACCTTCTCT GATTGCTCCT GGCGGCAACG CATACACGAA CCGTCGGATG GCGGCTTGTC TGCGCGACAT GGAAATCATT CTCCGCTACG TGACCTACGC GGTCTTCACC GGCGATGCTT CCATTCTCGA CGACCGCTGT TTGAACGGTC TGCGTGAGAC CTACTTGGCT CTGGGCGTGC CCGGTGCATC GGTGGCAGAA GGCGTTCGCA AGATGAAAGA CGCAGCTGTG GCGATTGTGA GCGACCGCAA CGGCATCACC CAAGGTGACT GTTCAGCGAT CATTTCCGAG CTGGGCAGCT ACTTCGACAA AGCTGCTGCT GCAGTTGCCT AG
|
Protein sequence | MTFDAFTKVV AQADARGEFL SDAQLDALSR LVAEGNKRID TVNRITGNAS SIVANAARAL FAEQPSLIAP GGNAYTNRRM AACLRDMEII LRYVTYAVFT GDASILDDRC LNGLRETYLA LGVPGASVAE GVRKMKDAAV AIVSDRNGIT QGDCSAIISE LGSYFDKAAA AVA
|
| |