Gene Synpcc7942_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1043 
Symbol 
ID3773973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1055969 
End bp1056622 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content57% 
IMG OID637799465 
Producthypothetical protein 
Protein accessionYP_400060 
Protein GI81299852 
COG category[I] Lipid transport and metabolism 
COG ID[COG0170] Dolichol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.416178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCA TTCTAGCGGT CGTAGCGTGG TTAGGATTGG TGGGCTTGCT GGCGTGGCTG 
GCCAGTCGTC ATCCCGACAT ACCCAATGAA TGGGTGCGCA AAATTGTCCA CATCGGCACC
GGCAACGTCA TTCTGATTGC TTGGGCGTTT CAAATTCCGG CTGCGATCGG AATTGCAGCA
GCGGTGCTGT TCTCGGGTGT GGCGTTGCTC TCCTTCTGGC TACCGATTTT GCCGGGGCTT
CAAAACGTTG GCCGCCATAG TCTCGGAACC TTTTTTTATG CTGTCAGCAT CGGCCTATTG
ATCGCTGGCT TCTGGCATTG GGCACCTCGC TACGCAGCGC TCGGCATCTT GGTGATGACC
TACGGTGATG GACTTGCTGC TTTGGTGGGG CAGCAGTGGG GACGCCACCG CTTTCACCTA
CAAGGGATTG GCCAGAAAAG CTGGGAAGGC AGCCTGACGA TGATGGCCGT CAGCTTTTTG
GTAGCGGTGA TTTTGCTGGG GTTAACCCAA ACCCCTGGCA CGATCGCGAT TAGCTTGGCA
GTCGCGATCG CGGCACCCTT GTTGGAACTC TGGTCTTGGT ATGGCATCGA CAACCTCAGC
GTGCCGCTGG GCTGCGCGAT CGTGGCCGCT GGCGTTAGCC ACCTATTCAG CTAA
 
Protein sequence
MSGILAVVAW LGLVGLLAWL ASRHPDIPNE WVRKIVHIGT GNVILIAWAF QIPAAIGIAA 
AVLFSGVALL SFWLPILPGL QNVGRHSLGT FFYAVSIGLL IAGFWHWAPR YAALGILVMT
YGDGLAALVG QQWGRHRFHL QGIGQKSWEG SLTMMAVSFL VAVILLGLTQ TPGTIAISLA
VAIAAPLLEL WSWYGIDNLS VPLGCAIVAA GVSHLFS