Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1043 |
Symbol | |
ID | 3773973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1055969 |
End bp | 1056622 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799465 |
Product | hypothetical protein |
Protein accession | YP_400060 |
Protein GI | 81299852 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0170] Dolichol kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.416178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGCA TTCTAGCGGT CGTAGCGTGG TTAGGATTGG TGGGCTTGCT GGCGTGGCTG GCCAGTCGTC ATCCCGACAT ACCCAATGAA TGGGTGCGCA AAATTGTCCA CATCGGCACC GGCAACGTCA TTCTGATTGC TTGGGCGTTT CAAATTCCGG CTGCGATCGG AATTGCAGCA GCGGTGCTGT TCTCGGGTGT GGCGTTGCTC TCCTTCTGGC TACCGATTTT GCCGGGGCTT CAAAACGTTG GCCGCCATAG TCTCGGAACC TTTTTTTATG CTGTCAGCAT CGGCCTATTG ATCGCTGGCT TCTGGCATTG GGCACCTCGC TACGCAGCGC TCGGCATCTT GGTGATGACC TACGGTGATG GACTTGCTGC TTTGGTGGGG CAGCAGTGGG GACGCCACCG CTTTCACCTA CAAGGGATTG GCCAGAAAAG CTGGGAAGGC AGCCTGACGA TGATGGCCGT CAGCTTTTTG GTAGCGGTGA TTTTGCTGGG GTTAACCCAA ACCCCTGGCA CGATCGCGAT TAGCTTGGCA GTCGCGATCG CGGCACCCTT GTTGGAACTC TGGTCTTGGT ATGGCATCGA CAACCTCAGC GTGCCGCTGG GCTGCGCGAT CGTGGCCGCT GGCGTTAGCC ACCTATTCAG CTAA
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Protein sequence | MSGILAVVAW LGLVGLLAWL ASRHPDIPNE WVRKIVHIGT GNVILIAWAF QIPAAIGIAA AVLFSGVALL SFWLPILPGL QNVGRHSLGT FFYAVSIGLL IAGFWHWAPR YAALGILVMT YGDGLAALVG QQWGRHRFHL QGIGQKSWEG SLTMMAVSFL VAVILLGLTQ TPGTIAISLA VAIAAPLLEL WSWYGIDNLS VPLGCAIVAA GVSHLFS
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