Gene Synpcc7942_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1027 
Symbol 
ID3773957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1041800 
End bp1042114 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content61% 
IMG OID637799449 
Producthypothetical protein 
Protein accessionYP_400044 
Protein GI81299836 
COG category[S] Function unknown 
COG ID[COG2052] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.925684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGA CAGCTCCTAG GATGGGGCCA CTGCCCCCGA CCACTTCAAC AATGGCTCAA 
GCCTTACTCA ACGCCGGTTT CGGTAACTTT GTCGCCGCCG ATCGCCTGAT TGCAATCGTC
AGTCCTGACT CCGCTCCGAT CCGGCGCACA GTGAGTGAAG CCCGCGAACG TGGGCAACTC
GTCGATGTCA CCTGCGGTCG GCGCACAAAG GCAGTTCTGA TCGCCGATTC AGGCCATGTG
ATTCTCTCCG CCCTGCAGCC AGAAACGATC GCGGGCCGCA TCCTCAACAG TCGCGGCGAC
CTCAGCGGCG CTTGA
 
Protein sequence
MEQTAPRMGP LPPTTSTMAQ ALLNAGFGNF VAADRLIAIV SPDSAPIRRT VSEARERGQL 
VDVTCGRRTK AVLIADSGHV ILSALQPETI AGRILNSRGD LSGA