Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1025 |
Symbol | |
ID | 3773953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1039168 |
End bp | 1039638 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637799445 |
Product | TPR repeat-containing protein |
Protein accession | YP_400042 |
Protein GI | 81299834 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGACC CTAGCTTGGC AGCGCTGCTG TCGGATCTCA AAGACACTGA ACCTCAAGTG CGCGATCGCG CCACTCAGCA ACTTTGGCAG CGCTGGTATC GCCAGAAAGG AACCTATGGT CTGAATGGGC TACAGCGGGC GGAAGTGCTG ATGACTGCTG GTGAAATGGC AGAGGCGGAG CAACTCTTAA GTGACTTGAT TAACCAACTG CCAGACTTTG CTGAAGCGTG GAACCGTCGT GCGGTTCTGC ACTACTTGCA AGGGCGCTAT TCCGAGTCCT TGGAAGATTG CGATCGCGTC ATCGACCTCA ACCCCATTCA CTTTGGGGCT TTGCACGGCA AGGGATTGAG CTTGGCAGCC CTCGGTCAGT ATCGAGAGGC GATCACTGCT TTTCGCGCCG CCCTTGAGAT CCAGCCCTAC GCTCTGATCA ACCAACGCTT GATTCTGGAA TGCACAGCCC GGCTATCCTA G
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Protein sequence | MEDPSLAALL SDLKDTEPQV RDRATQQLWQ RWYRQKGTYG LNGLQRAEVL MTAGEMAEAE QLLSDLINQL PDFAEAWNRR AVLHYLQGRY SESLEDCDRV IDLNPIHFGA LHGKGLSLAA LGQYREAITA FRAALEIQPY ALINQRLILE CTARLS
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