Gene Synpcc7942_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1025 
Symbol 
ID3773953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1039168 
End bp1039638 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content56% 
IMG OID637799445 
ProductTPR repeat-containing protein 
Protein accessionYP_400042 
Protein GI81299834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACC CTAGCTTGGC AGCGCTGCTG TCGGATCTCA AAGACACTGA ACCTCAAGTG 
CGCGATCGCG CCACTCAGCA ACTTTGGCAG CGCTGGTATC GCCAGAAAGG AACCTATGGT
CTGAATGGGC TACAGCGGGC GGAAGTGCTG ATGACTGCTG GTGAAATGGC AGAGGCGGAG
CAACTCTTAA GTGACTTGAT TAACCAACTG CCAGACTTTG CTGAAGCGTG GAACCGTCGT
GCGGTTCTGC ACTACTTGCA AGGGCGCTAT TCCGAGTCCT TGGAAGATTG CGATCGCGTC
ATCGACCTCA ACCCCATTCA CTTTGGGGCT TTGCACGGCA AGGGATTGAG CTTGGCAGCC
CTCGGTCAGT ATCGAGAGGC GATCACTGCT TTTCGCGCCG CCCTTGAGAT CCAGCCCTAC
GCTCTGATCA ACCAACGCTT GATTCTGGAA TGCACAGCCC GGCTATCCTA G
 
Protein sequence
MEDPSLAALL SDLKDTEPQV RDRATQQLWQ RWYRQKGTYG LNGLQRAEVL MTAGEMAEAE 
QLLSDLINQL PDFAEAWNRR AVLHYLQGRY SESLEDCDRV IDLNPIHFGA LHGKGLSLAA
LGQYREAITA FRAALEIQPY ALINQRLILE CTARLS