Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1010 |
Symbol | |
ID | 3773938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1021969 |
End bp | 1022700 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799430 |
Product | ribosomal large subunit pseudouridine synthase B |
Protein accession | YP_400027 |
Protein GI | 81299819 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAC GGCTGCAGAA GATTTTGTCG CAATTGGGTG TCGCCTCCCG ACGACAGGCG GAACAGTGGA TCCAACAAGG ACGAGTTACG ATCAATGGCC GCGTCGCTGA AATTGGCCAG CAGGCTGACC TCAAGCGCGA TCGCATTCAC TTGGATGGCA AACGGCTACG CCCCAAGCAT CGGCCCGAGG CCCGTTATCT GCTGCTCCAT AAACCTGTGG GTGTAGTCTC CACCTGCCGT GATCCGCAGC GGCGGCGCAC CGTCATTGAT CTCGTCGATC CAGAATTTCG GCCGGGGCTG CATCCGGTGG GACGGCTGGA TACCGATAGC AGCGGCTTGC TCTTACTCTG CAATGACGGC GAACTGACCT ATCAAATCAG CCATCCCCGC TTTCACATCG AGAAAACCTA TCGCGTTTGG GTCGAAGGTC ATCCGCCAGC CTCGGTGCTA GAGCACTGGC GATCGGGGGT TTGGCTAGAC GACTATCAAA CGCTGCCGGC AGGTGTGCGA ATCCTGCACG ATCGCGCTGA ATCGACGCTG CTCGAAGTGA TTTTGCACGA AGGCCGAAAT CGGCAAATTC GTCGGGTTGC CGAGCAGTTG GGGCATCCAG TTTTACGCCT GACCCGAGTC GCGATCGGGC CATTGCGTTT GGGATCGTTA CAGCCAGGGG AGTATCGTTC TTTAACGGCG GCCGAAGTTT ATCGCCTCCG TCAGCTCGCA CAAGGAACCT GA
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Protein sequence | MAERLQKILS QLGVASRRQA EQWIQQGRVT INGRVAEIGQ QADLKRDRIH LDGKRLRPKH RPEARYLLLH KPVGVVSTCR DPQRRRTVID LVDPEFRPGL HPVGRLDTDS SGLLLLCNDG ELTYQISHPR FHIEKTYRVW VEGHPPASVL EHWRSGVWLD DYQTLPAGVR ILHDRAESTL LEVILHEGRN RQIRRVAEQL GHPVLRLTRV AIGPLRLGSL QPGEYRSLTA AEVYRLRQLA QGT
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