| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1005 |
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| Symbol | |
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| ID | 3773933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1016315 |
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| End bp | 1016944 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637799425 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_400022 |
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| Protein GI | 81299814 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.10158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCAGC TCTTGGACTA CGACGCCATC ATCTTCGACT TTGGTGGCGT GATTTTGGAC
TTGGACTATC AGTCGACTCG CCGTGCCTTT GAAGAACTCT GTGGCTGCGA CTGGCACGCT
CTTTACAGCC AGCAGCAACA AACGGCCCTG TTTGATGACT TTGAAACCGG TCGCATCGAC
CCAGCCACTT TTCGGGATAG TCTCCGCCAG TTGTTGGGTC AAGACTTGAG CGATCGCGCC
ATCGATACGG CTTGGAATGC CATGCTCGGC GGCGTGCCGC TGGTGCATGT CGAATTTTTA
GAACAGCTGC GATCGCAGCG TCCAATTTTT CTACTTTCCA ATACAAACGC CATCCATCAA
GAAGCTTTTG AGCAGCGCTT CATTGACGAT CATGGCGATC GCCACAGCAG CTTGCCTGCG
CTATTTGAGC AGGCCTATTA CTCGCATCAC TTGGGCGATC GCAAACCCCA CGCCAGCATT
TTTCAGACTG TGATCGATCG TCATCAACTC GACCCTAGCC GCACGCTTTT CCTAGATGAC
AGTCCTCAGC ATCTTGAAGG AGCTAAACAG GCCGGATTGC ACACGGCTTG GATTCCCTCA
GGGCAGCTCT TAGAGCAAGT TCAGCTCTGA
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| Protein sequence | MLQLLDYDAI IFDFGGVILD LDYQSTRRAF EELCGCDWHA LYSQQQQTAL FDDFETGRID
PATFRDSLRQ LLGQDLSDRA IDTAWNAMLG GVPLVHVEFL EQLRSQRPIF LLSNTNAIHQ
EAFEQRFIDD HGDRHSSLPA LFEQAYYSHH LGDRKPHASI FQTVIDRHQL DPSRTLFLDD
SPQHLEGAKQ AGLHTAWIPS GQLLEQVQL
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