Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0984 |
Symbol | recO |
ID | 3775373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 992870 |
End bp | 993670 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637799403 |
Product | DNA repair protein RecO |
Protein accession | YP_400001 |
Protein GI | 81299793 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.444728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0717159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCGCA CTTACACCAC CACTGCGATC GTGCTCAAGG CCACGCCCCT TGGGGAGGCC GATCGCCTGT TAACCCTGCT CTCGCCGGAT CAAGGACTCC TGCGAGTCGT CGCGACGGGG GCCCGCAAAC CGCGATCAAA ATTGGGAGGC CGCACCGCTC TCTTTGTGGT TGGCGACTGT TTGATTGCCT GCGGCAAAAG TCTCGATCGT CTCCAGCAAG TTGAAACCTT GACCAGCCAT ACGGCCCTCA GTGGTGACTT GGCCCGCCTG GCAGCGGCGC AATATCTCAC CGAACTGGTA CTCGCTCAGG CCCTTGAGCG CCATCCCCAA CCCGAACTCT TCGCCCTGCT CTGCCGCGAT CTCGCTCGGA TTGAAACCCA GTCAGGGCTT GAAGTTTTAC CCTACCTCCT CCAAAGCACC TGGCAGCTGT TGGCCTGGGC GGGCTGGGCT CCGCAAACCC ACTATTGCTG CCTGACTCAA CAGGCTGTGC AACCGCGACT GGAACAATCT CGTTGGCGAG TGCGCTATAG CCCCAGTTTG GGCGGTGTGT TGGCCGATAC TGCTGCGTAT CAGCGTCGCC CCAATCAGCG AGAATTGTTG TTGACCGCCA CGGAGTTGGC TGCCTTGCAA CAGATTCCCA CCAGCCAAAC GGTACTGCCG CTGGCAAGCC TGCCCCGCGA GGCCTGGCAA ATGTTGGAGC GAGCACTCCG CCACTCTGCC GAGTATCATC TGGAACGGCC CTTACAATCA GCGCTGTTAC TAGAGACGTT GCTGACAGGA TCCCATGTTG CCTCTGTCTG A
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Protein sequence | MSRTYTTTAI VLKATPLGEA DRLLTLLSPD QGLLRVVATG ARKPRSKLGG RTALFVVGDC LIACGKSLDR LQQVETLTSH TALSGDLARL AAAQYLTELV LAQALERHPQ PELFALLCRD LARIETQSGL EVLPYLLQST WQLLAWAGWA PQTHYCCLTQ QAVQPRLEQS RWRVRYSPSL GGVLADTAAY QRRPNQRELL LTATELAALQ QIPTSQTVLP LASLPREAWQ MLERALRHSA EYHLERPLQS ALLLETLLTG SHVASV
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