Gene Synpcc7942_0984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0984 
SymbolrecO 
ID3775373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp992870 
End bp993670 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content60% 
IMG OID637799403 
ProductDNA repair protein RecO 
Protein accessionYP_400001 
Protein GI81299793 
COG category[L] Replication, recombination and repair 
COG ID[COG1381] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00613] DNA repair protein RecO 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.444728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0717159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCGCA CTTACACCAC CACTGCGATC GTGCTCAAGG CCACGCCCCT TGGGGAGGCC 
GATCGCCTGT TAACCCTGCT CTCGCCGGAT CAAGGACTCC TGCGAGTCGT CGCGACGGGG
GCCCGCAAAC CGCGATCAAA ATTGGGAGGC CGCACCGCTC TCTTTGTGGT TGGCGACTGT
TTGATTGCCT GCGGCAAAAG TCTCGATCGT CTCCAGCAAG TTGAAACCTT GACCAGCCAT
ACGGCCCTCA GTGGTGACTT GGCCCGCCTG GCAGCGGCGC AATATCTCAC CGAACTGGTA
CTCGCTCAGG CCCTTGAGCG CCATCCCCAA CCCGAACTCT TCGCCCTGCT CTGCCGCGAT
CTCGCTCGGA TTGAAACCCA GTCAGGGCTT GAAGTTTTAC CCTACCTCCT CCAAAGCACC
TGGCAGCTGT TGGCCTGGGC GGGCTGGGCT CCGCAAACCC ACTATTGCTG CCTGACTCAA
CAGGCTGTGC AACCGCGACT GGAACAATCT CGTTGGCGAG TGCGCTATAG CCCCAGTTTG
GGCGGTGTGT TGGCCGATAC TGCTGCGTAT CAGCGTCGCC CCAATCAGCG AGAATTGTTG
TTGACCGCCA CGGAGTTGGC TGCCTTGCAA CAGATTCCCA CCAGCCAAAC GGTACTGCCG
CTGGCAAGCC TGCCCCGCGA GGCCTGGCAA ATGTTGGAGC GAGCACTCCG CCACTCTGCC
GAGTATCATC TGGAACGGCC CTTACAATCA GCGCTGTTAC TAGAGACGTT GCTGACAGGA
TCCCATGTTG CCTCTGTCTG A
 
Protein sequence
MSRTYTTTAI VLKATPLGEA DRLLTLLSPD QGLLRVVATG ARKPRSKLGG RTALFVVGDC 
LIACGKSLDR LQQVETLTSH TALSGDLARL AAAQYLTELV LAQALERHPQ PELFALLCRD
LARIETQSGL EVLPYLLQST WQLLAWAGWA PQTHYCCLTQ QAVQPRLEQS RWRVRYSPSL
GGVLADTAAY QRRPNQRELL LTATELAALQ QIPTSQTVLP LASLPREAWQ MLERALRHSA
EYHLERPLQS ALLLETLLTG SHVASV