| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0971 |
|---|
| Symbol | |
|---|
| ID | 3775359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 977903 |
|---|
| End bp | 979261 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637799390 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_399988 |
|---|
| Protein GI | 81299780 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3330] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0471118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.38482 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCCAA ACGGGCTTTT GCAGTCAGAA AGTCTTGGCT GGACTGGAAT TTCTCTTGAT
CCCCAACCAA AGCTGCGGCA AGGTAGAAGC GTCGCATCCC CCATGCTTAT GTCTAAATCA
CCCTATCCAC TGGAGCAGAT GACCCTGCGA CAGTTGCGAC GCGTTGCCAG CGAATATGGC
GTGTCGCGCT ACAGCCGCAT GCGTAAGTCT GAGTTAATTG CCGCCATTCA AAAAATTGAG
GCAAATAGCG CCGTGCATAC TAGCCCTTCC CCCAGCAGCG ATCGCCAAGA AGAAGTCGAA
GCCACGAAAT ATGACGTGGG ACAACCGCAG CCGGTTGAAC CGATCGAGCT GACGGGTGTC
GATGCAGAGC TGCCCGATCT GCCGGAAGGC TACGGCGAAA GCCGCATTGT CCTGCTGCCT
CGCGACCCGC AGTGGGCCTA TGTGTACTGG GATGTGCCGG GCGATCATAA GCAAGCACTC
AAATCACAAG GGGGACAACT ACTAGCGCTG CGCTTCTACG ACGTCACAGA TCTTGATCTC
AACTATCAAT CCCCCCACAG CTTGCAGGAA TATCCCTGCG ATGAGCTGGC GCGGGATTGG
TACCTGCCCG TACCGGTAAG CGATCGTGAT TACTTGGTAG AAATCGGCTA CCGCGCTGCA
GATGGCCGCT GGTTGTTGCT GGCTCGCTCT GCACCTGTGC GCGTACCGCC GGTCTATCCC
TCCGACTGGA TCGAAGATCA CTTCATCACC GTCAACTGGG ACGAAGACCT GCGAGGTCAA
ACCGTCTTCC AACTGGTGCC CCCCAGTCAA AAAGCCAGCT TGGCCAGCAG TGGCGGCGCT
GCGCCTGGGC CCGGAACCGT CAGCGACGAA ATCTTTGCCC TGTCGGAAGG GGCCGAGTCG
ATGCGCTTGG CGGGCTCGCT CTACGGTTCG CAGCACATGC GTCCGGTTCA TGAAGAAACC
CTCAGCTCCT ACGTTTTCCC CTCGGGTGTG GGCATGTGGG CGCTGCCAAC GGCTTCCGGC
TTGACTCAGT CGGGCGTCGG CATGGTCGGG TTCTCGGCGT CGCTGCCGCT GGAGCGGCAA
CCGCGCAAAT TCTGGCTGGT CGCGGATGCT GAGCTGATCA TCTACGGGGC CACGGAACCG
GATGCCACGG TCACAATCGG CGGCAAAGAG ATCAAACTCA GCCCCGATGG CACTTTCCGC
TTCCAGATGT CCTTCCAAGA CGGCGTGCTG GACTTCCCAA TCGAAGCCGT CGCTGTCGAT
GGCGAACAAA CGCGATCGAT TCGCATGACC TTCAACCGCG AAACCACCAA CCGCCGCACT
AACACCAAGG AAGAAGCCCA ACTGGAATGG TTCCAGTAG
|
|---|
| Protein sequence | MVPNGLLQSE SLGWTGISLD PQPKLRQGRS VASPMLMSKS PYPLEQMTLR QLRRVASEYG
VSRYSRMRKS ELIAAIQKIE ANSAVHTSPS PSSDRQEEVE ATKYDVGQPQ PVEPIELTGV
DAELPDLPEG YGESRIVLLP RDPQWAYVYW DVPGDHKQAL KSQGGQLLAL RFYDVTDLDL
NYQSPHSLQE YPCDELARDW YLPVPVSDRD YLVEIGYRAA DGRWLLLARS APVRVPPVYP
SDWIEDHFIT VNWDEDLRGQ TVFQLVPPSQ KASLASSGGA APGPGTVSDE IFALSEGAES
MRLAGSLYGS QHMRPVHEET LSSYVFPSGV GMWALPTASG LTQSGVGMVG FSASLPLERQ
PRKFWLVADA ELIIYGATEP DATVTIGGKE IKLSPDGTFR FQMSFQDGVL DFPIEAVAVD
GEQTRSIRMT FNRETTNRRT NTKEEAQLEW FQ
|
|---|
| |