Gene Synpcc7942_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0945 
Symbol 
ID3775332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp952793 
End bp953767 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content46% 
IMG OID637799363 
Producthypothetical protein 
Protein accessionYP_399962 
Protein GI81299754 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAACCT TTACTGACTG CTTGCGATCG CCCCTCACAA AAGCACACAT TCATACTCTC 
CAGATCAACT TGGGGAAGCG CTGTAATTTA GCCTGCAGTC ACTGTCATGT CGAAGCAGGG
CCGAAACGAA CGGAAGAACT GACAGAGGAG GTCTGTCAAC AACTGATTCA GTTAATTCAA
AAACATCCAG AAATTCAAGT TATTGACTTA ACAGGTGGTG CGCCGGAAAT GCTCTATGGC
TTTCGGCCTT TGGTAGAAGC TGCTCGTCAA GCAAACAAAA CGGTGATTGT GCGATCGAAC
CTCACGATTT ACTTTGAGCC AGGTTTTGAG GACTTACCTG AGTATTGTGC TGACAAACAG
GTGCGGATTG TCGCTTCACT TCCCTGCTAT TTGTCTGACA ATGTTGACAA GATGCGCGGC
CATGGCGTTT ATGATGCTTC GATCCGAGCT TTACAAAAAC TAACTGAATT GGGCTATGGC
AGTCAGCCTC AGTTAGTCCT TGATCTAGTC TATAATCCGC CACTGCCAAC GCAAGAAAAG
CAATTCCGAC TCACACCCAA TCAAATCAGT CTTGAGCAAG ACTATAAGAC TTTCTTACAG
GAAAAATTCA GCATTCAGTT TAATCATCTT TTGACAATCA CTAATCTCCC AATTGGCCGA
ACAGGTCAGT TCCTCAAGCG ACAAGATCTC TACGGAAAGT ATCTACAGTT TCTCTCTGAT
CACTTTAATT CTGAAACTGT CGAAGGTTTA ATGTGTCGCC ACCAGCTTTC GGTCGATTAT
CAGGGCCAAA TTTATGATTG CGACTTTAAT CAAATGGCAG AGGTTCCTGC GCTGAATCAG
CAGGGCAATC CCCTTACAGT GGCGAATTTG CTCGCCAGCG ATCGCCTCGA TTTAATCTCT
ACGATTCAAA CGCGCGATTA CTGCTACGGC TGCACAGCAG GTTCTGGTTC TAGCTGTGGC
GGTGCTTTAC TGTAA
 
Protein sequence
MPTFTDCLRS PLTKAHIHTL QINLGKRCNL ACSHCHVEAG PKRTEELTEE VCQQLIQLIQ 
KHPEIQVIDL TGGAPEMLYG FRPLVEAARQ ANKTVIVRSN LTIYFEPGFE DLPEYCADKQ
VRIVASLPCY LSDNVDKMRG HGVYDASIRA LQKLTELGYG SQPQLVLDLV YNPPLPTQEK
QFRLTPNQIS LEQDYKTFLQ EKFSIQFNHL LTITNLPIGR TGQFLKRQDL YGKYLQFLSD
HFNSETVEGL MCRHQLSVDY QGQIYDCDFN QMAEVPALNQ QGNPLTVANL LASDRLDLIS
TIQTRDYCYG CTAGSGSSCG GALL