Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0937 |
Symbol | |
ID | 3775324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 943435 |
End bp | 944127 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637799355 |
Product | hypothetical protein |
Protein accession | YP_399954 |
Protein GI | 81299746 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.110914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTTCC GTCAGCTCTT CGATCGCGAC ACTTGGACTT ACACCTACTT AATTGCCGAT GAAGCCAGTG GTGAAGCCGC ATTGGTGGAT CCTGTTTTAG AACAGTGCGA TCGCGATTTA GCGCTGCTGC AAGACCTGGG TCTGACGCTG AAGTTTTGCT TAGAAACTCA TCTCCACGCT GACCACATCA CCGCAGCTGG GCGGCTGCGG GAATTGACCG GCTGCGAAAC TGTTGTACCG GCAGGTGCAA ATGCGACCTG TGCTGATCGC TTTGTGGTGG AGGGCGATCG CCTCCAGGTT GGGTCAATTG CGATTACAGT GATCGAAACT CGCGGTCATA CCGATAGCCA TGCCGCTTAC TTGATCCATC AGGCGGAGTT GTTGACTGGC GACTCGCTAT TGATTCGTGG TTGTGGCCGT ACGGATTTTC AGAGCGGTGA TGCGGGTCAG TTGTTCGACT CGGTGCAACG TCTCTTCCAA CTGCCGGACA ACACCCGCGT TTGGCCTGGC CACGACTACA GAGGGCACAC CGTCTCCACG ATCGGTGAAG AAAAACGCCT CAATCGCCGT TTTGTAGGCC GCGATCGCCA AAGCTTTATC ACCTTCATGA ACAGTCTCGA CCTGCCTGAT CCGCAGCGAA TTATGGAAGC CGTGCCTGCC AACGAACGCT GCGGTCATCC CGCCACTAGC TAA
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Protein sequence | MLFRQLFDRD TWTYTYLIAD EASGEAALVD PVLEQCDRDL ALLQDLGLTL KFCLETHLHA DHITAAGRLR ELTGCETVVP AGANATCADR FVVEGDRLQV GSIAITVIET RGHTDSHAAY LIHQAELLTG DSLLIRGCGR TDFQSGDAGQ LFDSVQRLFQ LPDNTRVWPG HDYRGHTVST IGEEKRLNRR FVGRDRQSFI TFMNSLDLPD PQRIMEAVPA NERCGHPATS
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