Gene Synpcc7942_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0926 
Symbol 
ID3774925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp932734 
End bp933993 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content60% 
IMG OID637799344 
Producthypothetical protein 
Protein accessionYP_399943 
Protein GI81299735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGGC AGCGATGGAT GATGGGCGGC ACGATCGCCC TCTGGCTACT CGGTGCAACA 
CCCGGGATTG CTCAGACCCC GACCGATCCC GACACTGGGG CTCCAATTCC CCGCGCGGTC
TTACTCGATC TGACGACAGG GCCGAACGAT CCGCTCCTGC CGTCCAAACT GCCGACACGG
GGTTACACAC CCTTAGAAAA ACGAGCGATT CGAGAGGCGA TCGCCCAACT CCTGGATGCG
GCTGATGGGG CCGCCAACCT CCAGCAGGAT GACTTGGCCT TTGAGTTGCG CTTCCGGGCG
ATCCGTTTGC GCCAAGTCTT GGGTCTCGAG GAAGAACTGC CCCTGCTCAA GCTGACTGGC
CAGCAGGCGC GGACTAAAAA TCGTTCCGAT GAAGGTCAAG CGATTGCCAA GCGCCTGCAG
CAGATTGAGG CGACAACCCC AGACCTCAGT CCGGCGCAGC AATTGGATCT AGCGATCGCC
TACCGAGAGG TGCGGGACTT CGACAATGCT ATTCGTCTCT ATCGGCAACT GCTGACCCGG
GCGCAAGCCC CTAGCGATCG CCGCGATTTG CTCGATGCTC TGGCGACCTG TGAGTTTGAG
AGCTTTCGCT ACGCCGCCGC TGCCGAAACC TACGGTGCGC TAGTTGCTCT TCTGACCGAC
AACCCACTCT TGGATCTTGG CCAGACTTCT CAAGTCCAGC AAGCGCGGCT TGGACCCCGT
CAGGAACCCA GCTACAGTCA GCGGGAATGG GCGGTGCGGC AGCAAATTTT CAGTCTGGAG
CAAATCCAAC GCTATGCCGA AGCGATCGCG ATTCAGCAAG CGGAATTGGC TTTGATCCGG
CCTGACTTGC AACCGGCTTG GTTGCTGGCG ATCGCGGCGA ATCAACAGCG ATCGCGTCAG
TTGGTGCTTG CAGTGGAAAC CTACCAGACG GTCTATCGGC AGGCACTGCC TCTCGGTCAG
TTGGCGATCG CACGGGATGC ACTGGAAGCT CTGCGCGATC TTTACCAAGA ACAGAACCAA
ACGGCTGATG CGATCGCGGT CTATGACCTG CTGCTAGCCC AAGCGCGCAA TGAGGGTGAT
CTCTATGGCT TGATGGAAAA CTACGCGCGA CTGGGGCGAT ACCAACTCCG TCAGGGCGAT
CGCCCGGCGG CGGAACAGGC GCTGACCCAA GGTCAAAGCA TCTCGGGGCA GTTGGGCTTT
GTGGGCCCTG AACTGACGAC TCTCCAGACG CAGCTGAGCG CTTCCACCCC TGCACAGTAA
 
Protein sequence
MSGQRWMMGG TIALWLLGAT PGIAQTPTDP DTGAPIPRAV LLDLTTGPND PLLPSKLPTR 
GYTPLEKRAI REAIAQLLDA ADGAANLQQD DLAFELRFRA IRLRQVLGLE EELPLLKLTG
QQARTKNRSD EGQAIAKRLQ QIEATTPDLS PAQQLDLAIA YREVRDFDNA IRLYRQLLTR
AQAPSDRRDL LDALATCEFE SFRYAAAAET YGALVALLTD NPLLDLGQTS QVQQARLGPR
QEPSYSQREW AVRQQIFSLE QIQRYAEAIA IQQAELALIR PDLQPAWLLA IAANQQRSRQ
LVLAVETYQT VYRQALPLGQ LAIARDALEA LRDLYQEQNQ TADAIAVYDL LLAQARNEGD
LYGLMENYAR LGRYQLRQGD RPAAEQALTQ GQSISGQLGF VGPELTTLQT QLSASTPAQ