Gene Synpcc7942_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0920 
Symbol 
ID3774098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp926720 
End bp926974 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content54% 
IMG OID637799337 
Productphotosystem I reaction center 
Protein accessionYP_399937 
Protein GI81299729 
COG category 
COG ID 
TIGRFAM ID[TIGR03049] photosystem I reaction center subunit PsaK 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCGG TTTTAGCTGC AATTCCCCAA ACTGTTGCTT GGAGCCCGAA AGTGGCTCTA 
GTGATGATTC TGAGCAACAT CGTGGCGATC GCCATTGGCA AGGCCACTAT CAAGATTCAG
AATGCTGGTC CGGCTTTGCC TTCGCCCCAA CTTTTTGGGG GTTTCGGTCT GCCTGCAGTC
CTCGCGACCG CTAGCTTCGG TCACATTTTG GGCATTGGCG TCATCCTCGG CTTGGCCAAC
ATCGGCAATC TCTAA
 
Protein sequence
MLPVLAAIPQ TVAWSPKVAL VMILSNIVAI AIGKATIKIQ NAGPALPSPQ LFGGFGLPAV 
LATASFGHIL GIGVILGLAN IGNL