Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0915 |
Symbol | |
ID | 3774093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 922388 |
End bp | 922837 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637799332 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_399932 |
Protein GI | 81299724 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.249833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGAAAA TTCTTGTCTT GCATGGCCCC AACCTCAACC TCTTGGGGCT GAGAGAGCCG ACAATCTACG GCCAAACAAC GCTGGCTGAA ATTGATGCCG ACCTAATTCA ACTGGGTCAG ACTCTTGGGG TTGACGTTTC AACACTCCAA AGCAACCACG AGGGCGTCTT GGTCGATGCC ATCCACACAG CGCGGGAGCA TCAAGACGGT CTTGTGATCA ATGCCGGTGC TTACACCCAC ACCAGTGTGG CGATTCGAGA CGCGATCGCG GGCACCCAAA TTCCGACGGT GGAAGTCCAT CTCAGCAATA TCCACAAGCG CGAAGCCTTT CGGCATCATT CCTATCTAGC CCCCGTTGTG GTTGGCCAGA TTTGCGGCTT TGGCCCCGAT AGTTACCGGC TTGGACTGCA GGCAATCGTC AACCACTTGC AAGCCCTAGC AACGGTATGA
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Protein sequence | MLKILVLHGP NLNLLGLREP TIYGQTTLAE IDADLIQLGQ TLGVDVSTLQ SNHEGVLVDA IHTAREHQDG LVINAGAYTH TSVAIRDAIA GTQIPTVEVH LSNIHKREAF RHHSYLAPVV VGQICGFGPD SYRLGLQAIV NHLQALATV
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