Gene Synpcc7942_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0912 
Symbol 
ID3774090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp919325 
End bp921283 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content59% 
IMG OID637799329 
ProductDNA polymerase III, tau subunit 
Protein accessionYP_399929 
Protein GI81299721 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.850857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACG AACCGCTGCA TCACAAATAT CGGCCGCAAT GCTTTGCTGA TTTGGTAGGG 
CAAGAGGCGA TCGCGCGAAC CCTCAGCCAA GCGCTGGCCC AGCAGCGAAT TGCCCCTGCT
TATCTATTCA CAGGTCCACG CGGCACAGGG AAAACCTCCA GCGCCCGCAT TCTGGCGAAA
TCGCTGAATT GTCAGCAAAG CACCGTGCCT ACGGCAAGTC CCTGCGGTGA ATGTGAAGCC
TGTCGAGCGA TCGCACGGGG CAACGCGCTG GATGTCATTG AGATTGATGC AGCATCCAAC
ACGGGTGTCG ATAACATCCG TGAGCTGATT GAACGCGCCC AGTTCGCGCC GGTGCAGTGT
CGCTTCAAGG TCTACGTGAT CGACGAGTGT CACATGCTTA GCACGGCAGC CTTTAATGCC
CTGCTCAAAA CCTTGGAAGA ACCGCCCGAT CGCGTGGTGT TTGTGCTGGC AACCACCGAT
CCGCAGCGCG TGTTGCCGAC GATTATTTCC CGTTGTCAGC GCTTTGACTT TCGCCGCATT
CCCCTGCAGG CGATGACAGA TCACCTGCAA GTCATTGCCC AGAAAGAATC CATTGAAATC
GAGCCGACAG CGATCGCCTT GGTGGCGCAA CTGGCTCAAG GTGGTCTGCG CGATGCTGAG
AGTCTGCTTG ATCAACTAGG ACTGCTGCCG CCTCCCGTCA CACCGGAAGC CGTCTGGGAT
CTACTCGGGG CGGTGCCGGA ACGTCAGCTG CTACAACTGC TGGAAGCGAT CGCCGCGAAC
GATCCAGAAG CCCTGTTGAC GCTGATTCGG CAACTGCTCG ATCGCGGTCG CGAACCGTTG
ACGGTACTGC AAAATCTGAC TGCCTTCAGT CGCGATCTGC TGATTGCTAG GACGGCTCCC
CAGCGCCGCG ACTTAACCAC GGTCACGGAA GCGACTTGGC AAGAACTCTG CACTTTTGCG
GAAGATTGGA CACCGGAACA GATTCTGCAA TTGCAACAAC ACCTGCGGCA GTCTGAACTC
CAGATCAAAA ACACGACGCA GCCCCGCCTC TGGCTGGAAG TCGCTTTACT CGGGTTGCTG
CCCAGCGCTC AAGCTCCCGT AACGACTGCA CCGCCGGCGA TCGCTGCTCC AGTTACCCGA
CCCGTGAGTA TTCCTGCAGC AGTAGTCCCT GCCGAAACAC CGTCCAGTCC TGCAGCCGTA
GCGCCAGTTG CGATTCCTGT GGCTCCAGCA GTAACAACCA CCCCGCCAGA AGTGCCGGCG
ATCGCGGCTG CCGCGCCAGA ACCGCTCAAT CTCGAAGAAC TCTGGCAACG CGTTTTAATC
AACATCGCCT CGCGAGGGAC GCAAATGCTG TTGCAGCAGC AAGGGCGTTT GTTGCGCTGC
CAAGCCGGTC AAGCTGTGGT CAGCGTGCCG CCCAACTGGC TCTCGATAGT TCAGGGTAAG
CGCAATCTCC TGGCCGAAGC GTTTCAAACT GTTTTGGGTC AAGCGATCGC TGTGGAGTTG
GAGTCCAGCA GCGGCACAGA TCCTAATCCC GTTAGTTTGC CGCCGCCACC AGTTGTAATC
GAGATGCCGC GATCGCCTGC TTCACCTGCC GTGACGCCCC GATCGGCTCC CCCCTCTGAA
CCGATCGCAG CAGCCCCCCG TCAGCCCGCG ATCGCGACGA TCGCGCCGCC GCCAGTGGCA
GTCGCTCCAC CAGTTCCCCC GCCTGCTCCA TCCCCACCGA TTCCACAATC AAAACCGGTT
GCGATCGCTA CCAGCCCATC CAAATCCCCC GAGGTTGTGC CAGCGCCTCA GCTTGAAACA
CCGCCCGCAG CACTCCGCCC GCTAGCCGAT TGGGAACTGG ATCCGGGGCT GAAAGCAGCT
AGAAGTTTGG CACAGTTTTT CAATGGCGAA GTGGTCAGCG ATCGCGAGTC TGAGAGTGAC
ACCAGCGAGG CTGTTGTTGA ACCAGATGTC GATTTCTAG
 
Protein sequence
MAYEPLHHKY RPQCFADLVG QEAIARTLSQ ALAQQRIAPA YLFTGPRGTG KTSSARILAK 
SLNCQQSTVP TASPCGECEA CRAIARGNAL DVIEIDAASN TGVDNIRELI ERAQFAPVQC
RFKVYVIDEC HMLSTAAFNA LLKTLEEPPD RVVFVLATTD PQRVLPTIIS RCQRFDFRRI
PLQAMTDHLQ VIAQKESIEI EPTAIALVAQ LAQGGLRDAE SLLDQLGLLP PPVTPEAVWD
LLGAVPERQL LQLLEAIAAN DPEALLTLIR QLLDRGREPL TVLQNLTAFS RDLLIARTAP
QRRDLTTVTE ATWQELCTFA EDWTPEQILQ LQQHLRQSEL QIKNTTQPRL WLEVALLGLL
PSAQAPVTTA PPAIAAPVTR PVSIPAAVVP AETPSSPAAV APVAIPVAPA VTTTPPEVPA
IAAAAPEPLN LEELWQRVLI NIASRGTQML LQQQGRLLRC QAGQAVVSVP PNWLSIVQGK
RNLLAEAFQT VLGQAIAVEL ESSSGTDPNP VSLPPPPVVI EMPRSPASPA VTPRSAPPSE
PIAAAPRQPA IATIAPPPVA VAPPVPPPAP SPPIPQSKPV AIATSPSKSP EVVPAPQLET
PPAALRPLAD WELDPGLKAA RSLAQFFNGE VVSDRESESD TSEAVVEPDV DF