Gene Synpcc7942_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0903 
Symbol 
ID3774081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp911756 
End bp914341 
Gene Length2586 bp 
Protein Length861 aa 
Translation table11 
GC content58% 
IMG OID637799320 
Productbifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 
Protein accessionYP_399920 
Protein GI81299712 
COG category[C] Energy production and conversion 
COG ID[COG1049] Aconitase B 
TIGRFAM ID[TIGR00117] aconitate hydratase 2 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0101565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAG CCTACCGCCA AGCCGCCGCT GAGCGCGAAG CCTTGGGGGT TCCGCCGCTG 
CCGCTGGATG CGGACCAAAC AGCAGCCCTG TGTGAGCTCT TGCAAGCCCC GCCTGTGGGT
GAGGAAGCGA CGCTACTCCA TCTGTTGCGC GATCGCGTGC CCCCAGGGGT TGACCAGGCT
GCCTACGTCA AAGCAACCTT TCTCAGTGCG ATCGCCCACG GTGAAACCAC CAGTCCGCTG
ATCATGCCGG TCGAGGCAGT TGAACTGCTG GGCACGATGA TCGGCGGTTA CAACGTCGCC
GCGCTGATTG ATCTACTTAA GAGTGCAGAT GTGGCGATCG CTACGGCCGC CGTTGCCGCT
CTCAGCAAAA CCCTGCTGGT TTACGACGCT TATAACGACG TTGTCGCACT GGCTGAAACC
AATGCCTACG CCCAACAAGT CCTAGAGTCT TGGGCAAAGG CCGAGTGGTT CACCAGCAAA
CCCACTCTGC CGGAAGCGAT CACCGTCACG ATCTTCAAAG TGCCGGGCGA AACCAACACC
GACGATCTCT CGCCGGCCAC TCACGCCACC ACCCGCCCTG ACATTCCGCT CCATGCCCAA
GCGATGCTGG AAACGCGGCT GCCCGGTTCC CTCGAAACCA TTCCGGTGCT GAAAGAGAAA
GGGTATCCTC TCGCCTACGT TGGCGATGTG GTCGGCACCG GCTCTTCGCG GAAATCCGCG
ATTAACTCGG TTCTCTGGCA CATCGGCGAA GACATCCCCT TCGTGCCCAA CAAGCGCAGC
GGTGGCATTA TCCTCGGCGG CAAAATCGCC CCGATCTTCT TCAACACCGC CGAAGACTCG
GGCGCACTGC CAATCGAATG CGATGTCAGC GCCCTCGACA CTGGCATGGT CGTTACTATT
TATCCCTACG AAGGCGTCAT TAAAGATGAG GCAGGCACTG TCCTCTCAAC CTTTAGCCTC
AAGCCCGACA CAATTCTGGA TGAAGTGCGG GCGGGTGGCC GGATTCCCCT GCTGATCGGG
CGATCGCTCA CGGATAAAGT GCGATCGCAG CTCGGTCTAC CCGTCAGCGA CGTTTTTGTG
CGTCCGCAAC CGCCCGCGGA TACCGGCAAA GGCTTCACGC TGGCGCAAAA AATGGTCGGT
CGCGCCTGCG GTCTTCCCGG CGTGCGTCCC GGCACGAGTT GTGAACCAAT CATGACCACT
GTTGGTAGCC AAGACACCAC GGGGCCGATG ACACGAGACG AGATGAAGGA GCTAGCTTGC
CTCGGCTTCA GCGCCGACTT GGTAATGCAG AGCTTCTGTC ACACAGCCGC CTATCCCAAG
CCTGTTGACA TCAAAACCCA CAAAACCCTG CCGGACTTCA TTGCCCAGCG TGGGGGGGTC
GCCCTCAAAC CGGGGGATGG CATCATTCAC AGCTGGCTCA ATCGCATGCT ACTGCCCGAC
ACCGTCGGCA CCGGCGGCGA TAGCCATACC CGCTTCCCGC TAGGGATTTC CTTCCCGGCT
GGTTCCGGTC TGGTAGCGTT TGCAGCTGCG ATCGGGGCGA TGCCACTGGA TATGCCAGAA
TCCGTGCTCG TGCGCTTCAC GGGTTCACTG CAACCCGGCA TCACGCTGCG GGATGTGGTC
AATGCCATTC CTTATCAAGC AATCCAGCAA GGGCTGCTGA CTGTCTCTAA AGAAAATAAA
GTCAACGTCT TCTCCGGCCG GATCATGGAG ATTGAGGGAC TCCCAGATCT GAAGCTCGAG
CAAGCTTTCG AGCTAACCGA TGCCACAGCG GAGCGTTCCT GCGCTGGCAG CACGATCAAA
CTCAGCGAGG ATACTGTCGC CGAATACCTG CGATCGAATG TGGCGCTGAT GAAGAACATG
ATCGCCCGCG GCTACGAAGA CAGCCGCACC TTGGCACGTC GCATCCGTCA GATGGAAGAT
TGGCTGGCCA ATCCACAGCT GCTCTCGGCC GATGAAGACG CCGAATATGC AGCCGTGATC
GAGATCAATC TCGATGAGTT GACTGAGCCG ATTCTGGCTT GCCCGAACGA TCCGGATAAC
GTCAAAAAGT TGTCAGAAGT GGCTGGCGAT CCCATCCACG AAATCTTCAT TGGCTCCTGT
ATGACCAACA TTGGCCACTA TCGCGCTGCG GCCAAAGTGC TGGAAGGTGA AGGCCAAGTG
GGCGGTCGCC TCTGGATTTG CCCACCGACC CGGATGGATG AAGACCGGCT CAAGGAAGAA
GGCTACTACA GCACCTTCGC AGCGGCTGGT GCTCGCTTGG AAGTGCCGGG TTGTTCGCTC
TGCATGGGTA ACCAAGCTCG TGTTGCCGAT AACACCACGG TCTTCTCGAC CAGCACCCGC
AACTTCAACA ACCGTATGGG CAAGGGTGCT CAGGTCTATT TAGGATCGGC GGAATTGGCG
GCAGTCTGTG CACTCTTGGG CCGCATTCCC ACACTCGAGG AGTACTTGAA GGTGGCAGCT
GAGAAGATTA ATCCCTTTGC AGCTGATCTG TATCAGTACC TCAACTTCGA CCAACTAGAA
GGTTTTGCTG AGGAAGGTCG CGTTAAATCG ACTGAAGAAG TCGATCGCAT TTTGACCACT
GTGTAG
 
Protein sequence
MLEAYRQAAA EREALGVPPL PLDADQTAAL CELLQAPPVG EEATLLHLLR DRVPPGVDQA 
AYVKATFLSA IAHGETTSPL IMPVEAVELL GTMIGGYNVA ALIDLLKSAD VAIATAAVAA
LSKTLLVYDA YNDVVALAET NAYAQQVLES WAKAEWFTSK PTLPEAITVT IFKVPGETNT
DDLSPATHAT TRPDIPLHAQ AMLETRLPGS LETIPVLKEK GYPLAYVGDV VGTGSSRKSA
INSVLWHIGE DIPFVPNKRS GGIILGGKIA PIFFNTAEDS GALPIECDVS ALDTGMVVTI
YPYEGVIKDE AGTVLSTFSL KPDTILDEVR AGGRIPLLIG RSLTDKVRSQ LGLPVSDVFV
RPQPPADTGK GFTLAQKMVG RACGLPGVRP GTSCEPIMTT VGSQDTTGPM TRDEMKELAC
LGFSADLVMQ SFCHTAAYPK PVDIKTHKTL PDFIAQRGGV ALKPGDGIIH SWLNRMLLPD
TVGTGGDSHT RFPLGISFPA GSGLVAFAAA IGAMPLDMPE SVLVRFTGSL QPGITLRDVV
NAIPYQAIQQ GLLTVSKENK VNVFSGRIME IEGLPDLKLE QAFELTDATA ERSCAGSTIK
LSEDTVAEYL RSNVALMKNM IARGYEDSRT LARRIRQMED WLANPQLLSA DEDAEYAAVI
EINLDELTEP ILACPNDPDN VKKLSEVAGD PIHEIFIGSC MTNIGHYRAA AKVLEGEGQV
GGRLWICPPT RMDEDRLKEE GYYSTFAAAG ARLEVPGCSL CMGNQARVAD NTTVFSTSTR
NFNNRMGKGA QVYLGSAELA AVCALLGRIP TLEEYLKVAA EKINPFAADL YQYLNFDQLE
GFAEEGRVKS TEEVDRILTT V