| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0893 |
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| Symbol | |
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| ID | 3774071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 903201 |
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| End bp | 904283 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799310 |
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| Product | photosystem q(b) protein |
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| Protein accession | YP_399910 |
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| Protein GI | 81299702 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B)) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000240892 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000169599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGACTG CATTGCAGCG GCGCGAGAGC GCCAGCCTGT GGCAGCAGTT CTGCGAGTGG
GTAACCAGCA CCGACAACCG CCTCTATGTG GGTTGGTTCG GCGTGTTGAT GATCCCCACC
CTGCTGACCG CCACCATCTG CTTCATCGTT GCGTTCATCG CAGCGCCTCC CGTCGACATC
GACGGCATCC GCGAGCCCGT TGCTGGCTCC TTGATGTATG GCAACAACAT CATCTCTGGT
GCTGTTGTTC CTTCCAGCAA CGCCATTGGT TTGCACTTCT ACCCGATTTG GGAAGCCGCT
AGCCTCGACG AGTGGCTGTA CAACGGTGGT CCCTACCAAT TGGTAGTGTT CCACTTCCTG
ATCGGCGTTT TCTGCTACAT GGGCCGTGAG TGGGAACTGT CGTACCGCCT CGGTATGCGC
CCCTGGATCT GTGTTGCATA CAGCGCACCG GTTGCAGCAG CGACTGCAGT GTTCCTGATC
TACCCGATCG GCCAAGGTTC GTTCTCGGAC GGCATGCCCT TGGGTATCAG CGGCACCTTC
AACTTCATGT TCGTGTTCCA AGCAGAGCAC AACATTTTGA TGCACCCCTT CCACATGCTG
GGTGTGGCTG GTGTGTTCGG TGGTTCGCTG TTCTCGGCAA TGCACGGTTC GTTGGTGACC
AGCTCGCTGG TGCGTGAGAC GACCGAGACC GAGAGCCAAA ACTACGGCTA CAAATTTGGT
CAAGAGGAAG AGACCTACAA CATCGTGGCA GCCCACGGTT ACTTTGGTCG CTTGATCTTC
CAATACGCAT CGTTCAATAA CAGCCGTTCG CTGCACTTCT TCCTGGCTGC ATGGCCGGTC
GTGGGCATCT GGTTCACGTC CTTGGGCATC AGCACCATGG CGTTCAACCT GAATGGTTTC
AACTTCAACC AGTCGGTTTT GGATAGCCAA GGCCGTGTGA TCAACACCTG GGCAGATGTG
TTGAACCGTG CCAACTTGGG CATGGAAGTG ATGCACGAGC GTAATGCTCA CAACTTCCCG
CTCGACTTGG CAGCAGGCGA AGCGACCCCG GTTGCTCTGA CTGCACCTGC AATCAACGGC
TAA
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| Protein sequence | MTTALQRRES ASLWQQFCEW VTSTDNRLYV GWFGVLMIPT LLTATICFIV AFIAAPPVDI
DGIREPVAGS LMYGNNIISG AVVPSSNAIG LHFYPIWEAA SLDEWLYNGG PYQLVVFHFL
IGVFCYMGRE WELSYRLGMR PWICVAYSAP VAAATAVFLI YPIGQGSFSD GMPLGISGTF
NFMFVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLVRETTET ESQNYGYKFG
QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLAAWPV VGIWFTSLGI STMAFNLNGF
NFNQSVLDSQ GRVINTWADV LNRANLGMEV MHERNAHNFP LDLAAGEATP VALTAPAING
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