Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0888 |
Symbol | |
ID | 3774065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 894280 |
End bp | 894639 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637799304 |
Product | mannose-1-phosphate guanylyltransferase-like |
Protein accession | YP_399905 |
Protein GI | 81299697 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.749299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000147914 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGGTTG GCGATCGCGA TCAACGGCCT TGGGGACAGT TCGAAATTCT TGCCCAAGGC TCTGGCTATC AGGTCAAGCG TTTGGAGGTG CTGCCAGGGC AGCAGTTGAG CCTACAGCGT CACCAGCAGC GGCAGGAACA TTGGCTAGTC GTGCAAGGGC TGGCACGGGT GCAACTGGGC GATCGCCAGT TTTCTCTGCG CGTAGGGCAA TCGCTCGATA TCGCGATCGG GGAATGGCAT CGCCTGCAAA ATCCGGGGGA CGAGCTTTTA GCCCTGATTG AGGTGCAAAT GGGGGCCTAT CTCGGCGAAG ATGACATTGA GCGCCGCGCC GATGACTACG GACGCTGCCC AACGTCGTGA
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Protein sequence | MKVGDRDQRP WGQFEILAQG SGYQVKRLEV LPGQQLSLQR HQQRQEHWLV VQGLARVQLG DRQFSLRVGQ SLDIAIGEWH RLQNPGDELL ALIEVQMGAY LGEDDIERRA DDYGRCPTS
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