Gene Synpcc7942_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0888 
Symbol 
ID3774065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp894280 
End bp894639 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content59% 
IMG OID637799304 
Productmannose-1-phosphate guanylyltransferase-like 
Protein accessionYP_399905 
Protein GI81299697 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.749299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000147914 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGTTG GCGATCGCGA TCAACGGCCT TGGGGACAGT TCGAAATTCT TGCCCAAGGC 
TCTGGCTATC AGGTCAAGCG TTTGGAGGTG CTGCCAGGGC AGCAGTTGAG CCTACAGCGT
CACCAGCAGC GGCAGGAACA TTGGCTAGTC GTGCAAGGGC TGGCACGGGT GCAACTGGGC
GATCGCCAGT TTTCTCTGCG CGTAGGGCAA TCGCTCGATA TCGCGATCGG GGAATGGCAT
CGCCTGCAAA ATCCGGGGGA CGAGCTTTTA GCCCTGATTG AGGTGCAAAT GGGGGCCTAT
CTCGGCGAAG ATGACATTGA GCGCCGCGCC GATGACTACG GACGCTGCCC AACGTCGTGA
 
Protein sequence
MKVGDRDQRP WGQFEILAQG SGYQVKRLEV LPGQQLSLQR HQQRQEHWLV VQGLARVQLG 
DRQFSLRVGQ SLDIAIGEWH RLQNPGDELL ALIEVQMGAY LGEDDIERRA DDYGRCPTS