| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0876 |
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| Symbol | alaS |
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| ID | 3774053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 877976 |
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| End bp | 880675 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637799292 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_399893 |
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| Protein GI | 81299685 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.27264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0167096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCCCCA AGCAATACGG CATGATGGGT TTAATCTGCT CCCTGTCGTT TATTTCGCTT
CGGCAATCCA TGGCTGCCCC TGCTCTTAGC GGTGATCAAA TCCGCGAAAC CTTTCTGAAA
TTCTTTGAAG GCAAGGGGCA CCGTCGCCTA CCCAGTGCCT CGCTGATCCC TGAAGATCCA
ACGGTCTTGC TGACGATCGC AGGCATGTTG CCGTTCAAGC CGATCTTCCT CGGGCAGCAG
GTCGCGGAAG TGCCACGGGC CACAACGTCG CAAAAGTGCA TTCGCACCAA CGATATCGAG
AATGTGGGTC GCACGGCTCG CCACCACACC TTCTTTGAAA TGCTGGGCAA CTTCAGCTTC
GGCGACTATT TCAAGAAAGA AGCGATCGCC TTTGCTTGGG AACTCGTCAC GGAAGTGTTT
CAAGTGCCGG CGGAACGGCT AGCGGTTAGT GTCTTTGAAG AAGACGACGA AGCCTTTGCG
ATCTGGCGCG ATCAAATTGG TGTGCCAGAA GCACGGATCC AACGACTGGG CGCTAAAGAT
AATTTCTGGG CTTCCGGCCC GACGGGTCCC TGTGGCCCCT GCTCCGAGAT CTATTACGAC
TTCCATCCCG AGCTGGGCAA TGACGGCCTG GATCTGGAAG ATGACAGCCG CTTCATCGAG
GTCTACAACC TCGTGTTCAT GCAGTACAAC CGCGATGCAG CGGGCAATCT GACGGCGCTG
GAGAAGCAGA ATATCGATAC GGGCATGGGG CTGGAGCGCA TGGCTCAAGT CCTGCAAGGC
GTGCCCAATA ACTACGAAAC CGACCTGATT TTCCCGATCA TTCAAGCGGT GGCTGCGATC
GCCCAGCGAG ACTACGCCAG CGAGTCGGAA TCGGTCAAAG TCTCGCTGAA AGTGATCGGC
GATCACCTGC GTGCCGTCAC TCATTTGATT GCCGATGGTG TCACGGCTTC CAACCTCGGG
CGCGGCTATG TGCTGCGGCG ACTGATTCGG CGCGTGGTGC GCCATGGTCG CTTGATTGGC
ATCGATCGCC CCTTTACGGC GGAGATTGCC GAAACTGCGA TCGCTTTAAT GGCCGCGCAA
TATCCCAACC TGCGGGAACG GGAAGCGGCG ATTAAAGCAG AACTGACGCG GGAAGAACAG
CGCTTTTTGG AAACCTTGGA GCGCGGCGAA AAACTGCTGG CGGAACTGCT GGCTGCCGCC
ACCGATCAGA TTCGCGGCGA GGATGCCTTC GTCCTTTACG ACACCTACGG CTTCCCGCTG
GAACTGACCC AAGAGATTGC CGAAGAAAAA GGACTGACCG TCGATCTGGC TGGTTTTGAA
GCGGCGATGG CCGCCCAACG CCAGCGATCG CAAGCTGCCC ACGAAACGAT CGACCTGACG
GTGCAAGGGT CGCTCGATCG CCTTGCGGAA CAGATTCACC CGACTGAGTT TGTCGGCTAC
GGCGACGCGG TTGCCACGGC GAAAGTCACA GCGCTCCTCC GCGAAGGCCA AAGTGTTGAG
GCCGCAGAAG CGGGCGATCG CGTTCAGATC GTGCTCGATC ACACGCCGTT TTATGCGGAA
TCCGGCGGTC AAGTTGGCGA TCGCGGTGTC CTCACGGGCG AATCGTTGAT TGTTCGGATC
GAAGATGTCC AGAAAGAATC AGGTTTCTTC GTCCACTACG GCCAGATTGA GCGGGGTTTG
CTGCAAGTTG GCGATAGCGT TACGGCGCAA ATCGATCGCG CCTGCCGTCG CCGCGCCCAA
GCCAATCACA CCGCTACGCA CCTGCTGCAA GCAGCCTTGA AGCTGATTGT CGATGAAGGC
ATTTCCCAAG CGGGTTCGCT GGTTGCTTTC GATCGCCTAC GCTTCGACTT CAACTGTCCG
CGAGCCGTGA CACCGGAAGA GCTGCGCCAA ATCGAAGACC AGATCAACCA GTGGATTGCT
GAAGCTCACG GCACCGTGGT CGAGGTGATG CCGATCGCGA CGGCCAAAGC CAAAGGCGCG
GTCGCCATGT TCGGCGAAAA ATACGGTGCG GAAGTCCGCG TCATTGACGT GCCTGGCGTC
TCGATGGAGC TGTGCGGCGG CACCCACGTC GCCAATACCG CCGAGATTGG CCTGTTCAAG
ATCATCAGCG AAGCGGGTGT CGCTTCCGGC GTGCGACGGA TTGAAGCGGT GGCTGGCCCT
GCCGTGCTGG AATACCTCAA CGTCCGCGAT GCCGTTGTCC GCGACTTGAG CGATCGCTTC
AAGGCCAAAC CCGAGGAACT GAGCGATCGC GTTACGGCGC TGCAAGAGGA GTTGAAAGCC
AATCAGAAGC AGCTAACCGC GCTAAAAGCT GAACTGGCGA TCGCCAAATC CGATGCGCTG
GTGTCCCAAG CGATCCCAGT CGGTGACGCG CAAGTCTTGG TTGAAACCCT GACCGGTGTG
GATGCAGCCG CTCTGCAAAC CGCAGCGGAA CGACTCCAGC AAAAACTCGG CGATGCCGGT
GCCGTTGTCC TCGGTTCTAG TCCTGAAGAA GGCAAAGTAA CGCTAGTCGC AGCCTTTGGT
CCCGCGATCA TCGCCAAAGG ACTGAAAGCG GGTCAGTTCA TCGGCGGCAT TGCCAAAATC
TGTGGTGGCG GTGGTGGCGG TCGTCCCAAC TTGGCGCAAG CCGGTGGCCG TGATGCCAGC
AAGCTACCAG AAGCCATCGC AGCAGCCCTC GATCAGCTCA AGACTGCGAT CGCTAGCTAA
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| Protein sequence | MPPKQYGMMG LICSLSFISL RQSMAAPALS GDQIRETFLK FFEGKGHRRL PSASLIPEDP
TVLLTIAGML PFKPIFLGQQ VAEVPRATTS QKCIRTNDIE NVGRTARHHT FFEMLGNFSF
GDYFKKEAIA FAWELVTEVF QVPAERLAVS VFEEDDEAFA IWRDQIGVPE ARIQRLGAKD
NFWASGPTGP CGPCSEIYYD FHPELGNDGL DLEDDSRFIE VYNLVFMQYN RDAAGNLTAL
EKQNIDTGMG LERMAQVLQG VPNNYETDLI FPIIQAVAAI AQRDYASESE SVKVSLKVIG
DHLRAVTHLI ADGVTASNLG RGYVLRRLIR RVVRHGRLIG IDRPFTAEIA ETAIALMAAQ
YPNLREREAA IKAELTREEQ RFLETLERGE KLLAELLAAA TDQIRGEDAF VLYDTYGFPL
ELTQEIAEEK GLTVDLAGFE AAMAAQRQRS QAAHETIDLT VQGSLDRLAE QIHPTEFVGY
GDAVATAKVT ALLREGQSVE AAEAGDRVQI VLDHTPFYAE SGGQVGDRGV LTGESLIVRI
EDVQKESGFF VHYGQIERGL LQVGDSVTAQ IDRACRRRAQ ANHTATHLLQ AALKLIVDEG
ISQAGSLVAF DRLRFDFNCP RAVTPEELRQ IEDQINQWIA EAHGTVVEVM PIATAKAKGA
VAMFGEKYGA EVRVIDVPGV SMELCGGTHV ANTAEIGLFK IISEAGVASG VRRIEAVAGP
AVLEYLNVRD AVVRDLSDRF KAKPEELSDR VTALQEELKA NQKQLTALKA ELAIAKSDAL
VSQAIPVGDA QVLVETLTGV DAAALQTAAE RLQQKLGDAG AVVLGSSPEE GKVTLVAAFG
PAIIAKGLKA GQFIGGIAKI CGGGGGGRPN LAQAGGRDAS KLPEAIAAAL DQLKTAIAS
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