Gene Synpcc7942_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0875 
Symbol 
ID3774052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp877453 
End bp877887 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content56% 
IMG OID637799291 
Producthypothetical protein 
Protein accessionYP_399892 
Protein GI81299684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0854865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0227058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGTT CTTCCTTGAG TTTGGCTGAG CGCTGGGAAT CGGCAAAAGC AGGCTTGCTG 
GCTTTGGCGA CGGCGGTAAT TCCGGCAGCA GCGTTGATTG GCCTAGAGAT TCAGCGACCC
TCTGCCCTGC CGGCTTGGAC GACTTTGGCG GTGCATAGCG GCGCGATCGC GGTCAGTGTT
TTTCTCTTTG GCGTCACTTA CCGCTACGCC ATTCGCAGCG ACACGAATCC CCATCTGCGC
AATGGTTTGG TGGGAGCCTT TGGGTTAGTG CGCGGACTAG GACTGCTGGA AAACGGCGCA
ACGACCAGTC TGGATTTACC GTGGTTAACT TCGCAGTTGG GCGGTAGTCT ACTGCTGTTT
GCGCTTTGTG CAACTAGCTT GGATTTTGCG ATCGCGCGTG GTTGGTTACG CCCCATTCCC
TCTTCTCCCC AATAA
 
Protein sequence
MTRSSLSLAE RWESAKAGLL ALATAVIPAA ALIGLEIQRP SALPAWTTLA VHSGAIAVSV 
FLFGVTYRYA IRSDTNPHLR NGLVGAFGLV RGLGLLENGA TTSLDLPWLT SQLGGSLLLF
ALCATSLDFA IARGWLRPIP SSPQ