Gene Synpcc7942_0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0865 
Symbol 
ID3774042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp867986 
End bp868477 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content52% 
IMG OID637799281 
Productputative nucleotide-binding protein 
Protein accessionYP_399882 
Protein GI81299674 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000105408 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0156848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTG CAAGCTCTTT TGACGTCGTC AGCGACTTCG ATCAGCAAGA ACTGGTCAAC 
GCTGTTGATC AGGCGCGGCG CGAGATTACC AATCGCTACG ATCTTAAAGA TTCCGCTACG
ACCTTGGAAC TGACTGCCGA GACTCTGACG ATTAACACTG ACAGCGAGTT CAGCTTGGAT
GCGGTCGTCA CCCTGCTGCA AACTAAAGTC GCCAAGCGCA ATCTCTCGCT GAAAATTTTT
GACTTCGGCA AAGTCGAAAC TGCGAGCGGT AATCGCGTTC GTCAGGTCAT TACCCTGCAG
CGGGGCCTGA GCAGCGAGCT GGCGAAGGAT CTGTCGAAAC AGATTCGTGA CCAGTTCAAG
AAAGTGCAGG TTTCGATTCA AGGAGATGCC CTGCGGGTCA GTGCTAAGTC GAAGGATGAC
TTGCAGACTG TGATTCAATA CCTCAAGCAA CAGGACGTTC CGGCGCCGTT GCAGTTCACT
AACTATCGCT AG
 
Protein sequence
MATASSFDVV SDFDQQELVN AVDQARREIT NRYDLKDSAT TLELTAETLT INTDSEFSLD 
AVVTLLQTKV AKRNLSLKIF DFGKVETASG NRVRQVITLQ RGLSSELAKD LSKQIRDQFK
KVQVSIQGDA LRVSAKSKDD LQTVIQYLKQ QDVPAPLQFT NYR