| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0853 |
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| Symbol | |
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| ID | 3774029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 848870 |
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| End bp | 850105 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637799268 |
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| Product | L,L-diaminopimelate aminotransferase |
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| Protein accession | YP_399870 |
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| Protein GI | 81299662 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.217772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00920973 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGACCA TTAACGACAA TTACCTGAAG CTCAAAGCGG GCTATCTCTT CCCCGAGATT
GCACGGCGCG TCAATGCTTT TGCCCAAAGT AACCCCGAGG CAGCCATCAT CCGTCTGGGC
ATTGGCGATG TGACTGAGCC TCTGCCGGTT GCCTGTCGGC AAGCGATGAT TCAGGCTGTC
GAAGACATGG GCCAGCGTGA GAACTTTAAG GGCTATGGCC CTGAGCAGGG CTATGCTTGG
CTGCGTGAGA AGATTGCCGC CCATGATTTC CAATCGCGGG GCTGCGAGGT TGATGCCTCG
GAAATCTTTA TCTCCGATGG CTCCAAGTGC GACTGTGGCA ACATTCTCGA CATCTTTGGC
AACAACAACC GTATCGCCGT CACCGATCCG GTCTATCCGG TCTATGTCGA TACGAACGTC
ATGGCAGGGC ACACGGGTGA CGCCAACGAT CGCGGCGAAT ATGACGGCTT AGTCTATCTG
CCGATCAGTG CTGAAAACAA CTTCACGGCT GAAATTCCCA GCGAAAAAGT TGACCTGATT
TATCTGTGTT TCCCCAACAA CCCAACGGGT GCAGTTGCCA GCCGTGAGTA TCTGCAAGCC
TGGGTCGATT ACGCCCGCGC CAACGGAGCC ATCATTCTCT TCGATGCAGC CTACGAGGCA
TTCATTACCG ATCCGGCCAT TCCCCACTCA ATTTTTGAAA TTCCCGGCGC ACGGGATTGC
GCGATCGAGT TCCGATCCTT CTCCAAAAAT GCGGGCTTTA CCGGCACCCG TTGCGCTTTC
ACTGTCGTTC CCAAAGGCTT GAAAGGCAAA GCTGCTGATG GCAGCGAAGT CGAACTGTGG
GGGCTGTGGA ATCGCCGCCA ATCAACCAAG TTCAATGGCG TTTCCTACAT CGTTCAGCGC
GGTGCTGAAG CAGTCTATTC AGCAGAAGGG CAAGCCCAAA TTAAGGAGCT GGTGGCTTTC
TACCTCGAAA ATGCTCGCAT CATCCGCGAA GAGCTGACAG CAGCAGGGCT GGACGTGCAT
GGGGGCGTCA ATGCGCCCTA CGTTTGGGTG AAAACACCGG CGGGGCTGAC GAGCTGGGAC
TTCTTCGATA AGTTGCTGCA GGTCTGTAAT GTCGTCGGCA CGCCCGGTTC AGGCTTTGGT
GCGGCAGGCG AAGGCTACTT CCGCATTTCG GCGTTCAACA GCCGCGAAAA CGTGGTGACG
GCCATGCAGC GGATTCGCAG CGCTGGCTTG GCCTAG
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| Protein sequence | MATINDNYLK LKAGYLFPEI ARRVNAFAQS NPEAAIIRLG IGDVTEPLPV ACRQAMIQAV
EDMGQRENFK GYGPEQGYAW LREKIAAHDF QSRGCEVDAS EIFISDGSKC DCGNILDIFG
NNNRIAVTDP VYPVYVDTNV MAGHTGDAND RGEYDGLVYL PISAENNFTA EIPSEKVDLI
YLCFPNNPTG AVASREYLQA WVDYARANGA IILFDAAYEA FITDPAIPHS IFEIPGARDC
AIEFRSFSKN AGFTGTRCAF TVVPKGLKGK AADGSEVELW GLWNRRQSTK FNGVSYIVQR
GAEAVYSAEG QAQIKELVAF YLENARIIRE ELTAAGLDVH GGVNAPYVWV KTPAGLTSWD
FFDKLLQVCN VVGTPGSGFG AAGEGYFRIS AFNSRENVVT AMQRIRSAGL A
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