Gene Synpcc7942_0846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0846 
Symbol 
ID3774023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp840263 
End bp841081 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content58% 
IMG OID637799262 
Producthypothetical protein 
Protein accessionYP_399864 
Protein GI81299656 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0676] Uncharacterized enzymes related to aldose 1-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.721242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAG ATACGTTTAC GCCGTTACAG CTCCAGGTTG AAGGGGCGAG CCTGCGGTTC 
TGTCGCTACG GTGGGCAAGT ATTGTCCTGG CAACCCGCCG ATGGTCAAGA GCGCCTATTC
CTGAGCGATC GCAGTCTTTA CCAGTCCGGT CAGGCGATTC GCGGTGGCGT CCCGATCATC
TTTCCCCAGT TCTCGGGGCG CGGGTCATTG CCTAAGCATG GTTTTGCCCG CGATCGCGCT
TGGGCTTTGC TGCAGTGGGA TGAGGACAGC GGCCAAGCCG AGTTAGAGCT CCGAGAGTCA
CTAGAAACCT TACAGATTTG GCCGTTTGCT TTTCGGTTGG TGCTCAAGCT GCAACTCCGA
CCCCAGCAAC TGCAGCTGCA ACTCACTGTT GAGAACTGCG ATCGCCAACC TTGGTCGTTT
ACAGCAGCAC TGCACAGCTA TCTAGCGGTG CCGGATCTGG CCACTGTGCA TCTACAAGGA
CTGCAAGGGC GTTGGGGCAC GGAACAAACC ACGGGCGATC GCTGGCAGGA GATGGAGTGC
GATCGCCACT TCCCTCAAGC GATCGATGCG CTCTACGAGG CTCCGGCGCA GCCCTTGACC
TTGCTGGCTC CTCCTTGGTC AGCCCTTCAG ATCTGTCAGA CAGGGTTTAC CGAAACAGTG
ATCTGGAACC CGGGGTCAGC AGGGGTCAGT CAGATTGGCG ATCTGGCCTC CGGCTCAGAA
CAGCAGTTTC TCTGTGTGGA AGCAGCTGTC GTGCAGTCTC CTCCCCGCCT TGAACCTGGG
GAAATTTGGC AGGGGCAACA AGTCTTTCAG GTCGGTTGA
 
Protein sequence
MMEDTFTPLQ LQVEGASLRF CRYGGQVLSW QPADGQERLF LSDRSLYQSG QAIRGGVPII 
FPQFSGRGSL PKHGFARDRA WALLQWDEDS GQAELELRES LETLQIWPFA FRLVLKLQLR
PQQLQLQLTV ENCDRQPWSF TAALHSYLAV PDLATVHLQG LQGRWGTEQT TGDRWQEMEC
DRHFPQAIDA LYEAPAQPLT LLAPPWSALQ ICQTGFTETV IWNPGSAGVS QIGDLASGSE
QQFLCVEAAV VQSPPRLEPG EIWQGQQVFQ VG