Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0846 |
Symbol | |
ID | 3774023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 840263 |
End bp | 841081 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637799262 |
Product | hypothetical protein |
Protein accession | YP_399864 |
Protein GI | 81299656 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.721242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGAAG ATACGTTTAC GCCGTTACAG CTCCAGGTTG AAGGGGCGAG CCTGCGGTTC TGTCGCTACG GTGGGCAAGT ATTGTCCTGG CAACCCGCCG ATGGTCAAGA GCGCCTATTC CTGAGCGATC GCAGTCTTTA CCAGTCCGGT CAGGCGATTC GCGGTGGCGT CCCGATCATC TTTCCCCAGT TCTCGGGGCG CGGGTCATTG CCTAAGCATG GTTTTGCCCG CGATCGCGCT TGGGCTTTGC TGCAGTGGGA TGAGGACAGC GGCCAAGCCG AGTTAGAGCT CCGAGAGTCA CTAGAAACCT TACAGATTTG GCCGTTTGCT TTTCGGTTGG TGCTCAAGCT GCAACTCCGA CCCCAGCAAC TGCAGCTGCA ACTCACTGTT GAGAACTGCG ATCGCCAACC TTGGTCGTTT ACAGCAGCAC TGCACAGCTA TCTAGCGGTG CCGGATCTGG CCACTGTGCA TCTACAAGGA CTGCAAGGGC GTTGGGGCAC GGAACAAACC ACGGGCGATC GCTGGCAGGA GATGGAGTGC GATCGCCACT TCCCTCAAGC GATCGATGCG CTCTACGAGG CTCCGGCGCA GCCCTTGACC TTGCTGGCTC CTCCTTGGTC AGCCCTTCAG ATCTGTCAGA CAGGGTTTAC CGAAACAGTG ATCTGGAACC CGGGGTCAGC AGGGGTCAGT CAGATTGGCG ATCTGGCCTC CGGCTCAGAA CAGCAGTTTC TCTGTGTGGA AGCAGCTGTC GTGCAGTCTC CTCCCCGCCT TGAACCTGGG GAAATTTGGC AGGGGCAACA AGTCTTTCAG GTCGGTTGA
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Protein sequence | MMEDTFTPLQ LQVEGASLRF CRYGGQVLSW QPADGQERLF LSDRSLYQSG QAIRGGVPII FPQFSGRGSL PKHGFARDRA WALLQWDEDS GQAELELRES LETLQIWPFA FRLVLKLQLR PQQLQLQLTV ENCDRQPWSF TAALHSYLAV PDLATVHLQG LQGRWGTEQT TGDRWQEMEC DRHFPQAIDA LYEAPAQPLT LLAPPWSALQ ICQTGFTETV IWNPGSAGVS QIGDLASGSE QQFLCVEAAV VQSPPRLEPG EIWQGQQVFQ VG
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