Gene Synpcc7942_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0840 
Symbol 
ID3774017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp834991 
End bp835473 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content51% 
IMG OID637799256 
Producthypothetical protein 
Protein accessionYP_399858 
Protein GI81299650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.532109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0632137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG TGACGAAGCC GGCCAATCAA CCGGGTGATT TTCTGGTTGA TTATGAAGAG 
AAAGTCTTTC CGGATGTCAA AGCAGAACCC GGTGAAAAAG CACTGATCAC ATTTCACACA
GTCGCCTTTG AAGGGTCGAT CGGTCTCGTC AACCTTCTCC AAGCTAGCCG CCTAATTAAC
AAAGGCTTTG AAACATCCAT CTTGCTCTAT GGGCCTGGGG TCACTCTCGG GGTTCAGCGT
GGCTTTCCCA AGTTGGGTGA TGCAGCCTTT GATGGTCACT TGAACTTCAA CGCTCGGATT
CAAAAGTTCT TGGACCAAGG TGGCAAAGTC TACGCTTGCC GATTTGCCCT ACAGGCGCTT
TACGGTCATG GCGAAGGAGC TTTAATCCCG GGAATCCGTC CGATTAATCC CCTGGATGTG
ATGGATCTGA TCCTGATGCA CCGCAAGGAA GGGGCTTTTA TCCTCGACAC TTGGACGCTC
TAG
 
Protein sequence
MPEVTKPANQ PGDFLVDYEE KVFPDVKAEP GEKALITFHT VAFEGSIGLV NLLQASRLIN 
KGFETSILLY GPGVTLGVQR GFPKLGDAAF DGHLNFNARI QKFLDQGGKV YACRFALQAL
YGHGEGALIP GIRPINPLDV MDLILMHRKE GAFILDTWTL