Gene Synpcc7942_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0838 
Symbol 
ID3774015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp832860 
End bp833957 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content60% 
IMG OID637799254 
ProductElongator protein 3/MiaB/NifB 
Protein accessionYP_399856 
Protein GI81299648 
COG category[R] General function prediction only 
COG ID[COG2516] Biotin synthase-related enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.195743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.168484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAGT CAACGTCTCA GTCCTTAGGG GAGTTGGTGA CGGAACTCCA AGTACAAGGG 
GTGATGGCTC CGGCGGTTAG AGGAAATCCT GGTCGCCAAG GCGGTGCAGG GCCTTCGGAC
CATCGGGCGA TTACCCTCGA GGGCACAACA GTGATGGTGC CGGTTTACAA CTCGACGGCG
CAACAGTCGC CCTACCAGCT GACGACAACG GCGGATGGGG GTGTGGCTCT CCATCATCAA
GGCGAGCTGA CGACCACGCT GGAAACGCCG CCGGAACCCC ATTTCTACAA CTTGCAGACT
GCGGAAGGCA TTCCCTACAA GGCGATCGCC CTCCTGCACG GCAAGGATGT GCTGGCCACG
ACGCTGCAAC AGACCTGCAT TCGCTTTCGC GATCGCAGCG AGTCTTGCCA GTTCTGTGCG
ATCGAGCAGT CGCTGACCTC AGGCCAAACG ATTGTTCGAA AGACGCCAGA GCAGGTCGCA
GAAGTTGCGG CCGCAGCCGT TCGGCTGGAT GGCGTTCGGC AACTGGTAAT GACCACGGGC
ACGCCCAACA GTCGCGATCG CGGGGCTCGT CTGATGGCAG AAACAGCCGC AGCAGTGAAG
GCAGTGGTGG ACATACCGAT TCAAGCCCAG TGTGAGCCAC CGGATGATCC GGTCTGGTTC
AGCCGAATGA AAGCTGCGGG TGTCAACAGT CTGGGCATGC ATTTAGAAGT GGTGGAACCG
GAGGTGCGTC GTCGCATCTT GCCGGGGAAA TCGGAGCTGA CCCTCGAGCA TTACTACCGC
GCCTTTGAGC AGGCCGTGGC CGTCTTCGGT CGCGGTGAAG TCTCGACTTA CCTGCTAGCC
GGACTCGGGG ATAGCGCTGA CAGCTTGATC GACTGCAGTC GGCGGCTGAT TGCGATCGGC
GTTTATCCAT TCATCGTGCC GTTTGTGCCG ATCGCGGGGA CACCACTGGA ACGTCATCCG
GCTCCAACGA CCGCTTTCAT GCTGCAGATT TACGAAGCCG TGGGAGCACT GCTCCATGAT
TCCGATCTGC GATCGGCGGC CATGTCTGCG GGCTGCGCCA AATGTGGCGC TTGTTCTGCC
CTCTCGCTGT TCGAGTAG
 
Protein sequence
MPKSTSQSLG ELVTELQVQG VMAPAVRGNP GRQGGAGPSD HRAITLEGTT VMVPVYNSTA 
QQSPYQLTTT ADGGVALHHQ GELTTTLETP PEPHFYNLQT AEGIPYKAIA LLHGKDVLAT
TLQQTCIRFR DRSESCQFCA IEQSLTSGQT IVRKTPEQVA EVAAAAVRLD GVRQLVMTTG
TPNSRDRGAR LMAETAAAVK AVVDIPIQAQ CEPPDDPVWF SRMKAAGVNS LGMHLEVVEP
EVRRRILPGK SELTLEHYYR AFEQAVAVFG RGEVSTYLLA GLGDSADSLI DCSRRLIAIG
VYPFIVPFVP IAGTPLERHP APTTAFMLQI YEAVGALLHD SDLRSAAMSA GCAKCGACSA
LSLFE