Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0824 |
Symbol | |
ID | 3776002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 818189 |
End bp | 819895 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637799241 |
Product | hypothetical protein |
Protein accession | YP_399843 |
Protein GI | 81299635 |
COG category | [S] Function unknown |
COG ID | [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.896168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTATCG TGTGGTCCCA AATTAAACAT TTCCCACCGA TCGCAGGGCT GCGATCGCCC GCTGTGCGAG TGCGTTGGAT TGCTGTGCTG ACGGCGATCG CGGGCAGCCT GAATTTACTC GTGGCAGTGT TGCCGCATCT GCCTGAGCGA TCGCGCTGGC TAGGACAACT GGCTACTTTG ACCGTTGAAA CGCAAGGGCG AGTCGCTGGA GCTGTCATTG GCTTTATTTT GCTGACCCTA GCCAATCAGC TATTGCGCCG CAAGCAGGTC GCTTGGCTGC TGACGGTGCT GCTTTTAAGT CTCTCGGTTG CCCTCAAAGG CGTGCGAGCC CACCATCCAG CTTTGATTGC TCTCGACCTG ATCTTGCTGG GTTGCTTGGT CGGCGATCGC AAGATCTACA TCGCGCGCTC GGATGCGCCG TCGCGGGTGC GAGCGGTGCG GGTACTGTTG GGGGCGCTGC TGTTCAGTTT GGCCTACGGC ACCTTGGGGC TGTTTTGGCT CGATCGCCAC TACTCCCGCG ACTTCGATCT ATTCACGGCT CTTCAACAGG TGTTGCAGCT ATTTTTTAGC TGGGATGCCC GTGTGGCATT GCCCCAAACA CGGTTTGGTC AACTGTTTGC GGAATCAATT TTTAGCGTCG GGCTACTGAC GCTTGGCTAT GCCTTTTTGT TATTGCTACA ACCTGTTTGG CAACCACCGG CGACGGTGAC AGAACGACGG CAGGCGACCG CGATCGTGCG GGCCCATGGC CATACCTCTC TGGCGCGGTT GACGTTGCTG GAGGACAAAT CCTACTGCTT TAGTCCCAGC GGTGAGAGTC TGATTGCGTT TGTGCAACGG GGGCGGGGAG CGATCGCCTT GGGTGATCCA ATTGGTCCTG CCCGCGATCG CGAGGCGATC ATTCAGCAGT TTTTGCGGGA ATGTCAGCAG AACGATTGGT TGCCTGCGTT CTATCAGGTT CTACCCGATG ACTTGCCGCT CTATCAGCGT CAGGGCCTAG CCTCGGTTCA AATTGGTCAA GAAGCCGTCA TCCCTCTGCA AGACTTTAGC CTACAGGGCA AACGAGGGCG GGGCTTCCGC AGTACCCTCA GTCGTTTGGA ACGAGCTGGC TACCGCTTTG AGGTGATTCC AGCCGCAGAA ACATACCCCT TGCTACCTGA ATTGCGTTTC GTCAGCGATA CGTGGCTGAA GCGGATGAAA GGGCCAGAAA AACGCTTTTC GGTAGGCTGG TTTGATCGCG ATTACCTCAC CAGTGGCAGC ATTGCTGTCG TGCGATCGCA GGATGGCCAA ATTCAAGCGT TTGCCAACTG GGTTGAAGAA TTTCAGCGCA ATGAACTGAC GCTCGATTTA ATTCGCTTTT TGCCCAGTGC TGAAAGCAGC ACGATGGAGT TTTTACTTGT CAATACGATT TTGGCTGCTA AGGATCGAGG CTTTGATAGC TTCAGCTTAG GACTCTCGGC TCTTTCTGGT TTGGATCAAC TCGATCAACC GAATCAAGTG GAACAGGGCT TAGATTACCT CTATCGCCAC CTCGATCGCT TCTATCGCTT TCAAGGACTG CACAGCTTCA AAGAGAAGTT CCATCCCGAC TGGCAGCCAC GCTACTTTGT CTATCCCAAC TTGGCTGCTA TCCCGAGCCT AGTAGTCACC TTGGTTCGAG CAGATTCTGG CGATCGCTGG CTCGATTACT TCCGAGCTAA TGACTGA
|
Protein sequence | MTIVWSQIKH FPPIAGLRSP AVRVRWIAVL TAIAGSLNLL VAVLPHLPER SRWLGQLATL TVETQGRVAG AVIGFILLTL ANQLLRRKQV AWLLTVLLLS LSVALKGVRA HHPALIALDL ILLGCLVGDR KIYIARSDAP SRVRAVRVLL GALLFSLAYG TLGLFWLDRH YSRDFDLFTA LQQVLQLFFS WDARVALPQT RFGQLFAESI FSVGLLTLGY AFLLLLQPVW QPPATVTERR QATAIVRAHG HTSLARLTLL EDKSYCFSPS GESLIAFVQR GRGAIALGDP IGPARDREAI IQQFLRECQQ NDWLPAFYQV LPDDLPLYQR QGLASVQIGQ EAVIPLQDFS LQGKRGRGFR STLSRLERAG YRFEVIPAAE TYPLLPELRF VSDTWLKRMK GPEKRFSVGW FDRDYLTSGS IAVVRSQDGQ IQAFANWVEE FQRNELTLDL IRFLPSAESS TMEFLLVNTI LAAKDRGFDS FSLGLSALSG LDQLDQPNQV EQGLDYLYRH LDRFYRFQGL HSFKEKFHPD WQPRYFVYPN LAAIPSLVVT LVRADSGDRW LDYFRAND
|
| |