| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0821 |
|---|
| Symbol | |
|---|
| ID | 3775999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 814476 |
|---|
| End bp | 816077 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637799238 |
|---|
| Product | periplasmic oligopeptide-binding |
|---|
| Protein accession | YP_399840 |
|---|
| Protein GI | 81299632 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGC GTCAACTGTT GCTGGGCTGT CTGCTGCTCT TCTGGCTCTG TGTAGGGCTG
GTGGGCTGTG TGGCGCTCCC AAAGGCGATC GAGAGCGATC GCATTGTGGT GGGAACGGCA
GCGCGACTGC GAACTCTGGA TCCCGCCGAT GCCTATGAAC TGCTTTCGGG AGCTTTGCTC
TATGCCCTCG GCGATCGCCT CTATACAACG CGACCCGATA GCGTTGAAAT CGTGCCGCAA
CTGGCAACGG CTCTGCCAGA GATCAGTCCG GATGGCCTGA CCTATCGCAT TCCCCTGCGG
CAGGATGTGC GCTTCCACGA CGGCAGCCCG TTTAATGCGG CGGCCATGGC CTTCTCTCTG
CAACGCTTCA TCAAAAACGG TGGCCGCCCT TCCTATTTGC TGGGCGATCG CGTGGCCTCC
ATTCAGGCAA CTGGCGATTA CGAGCTGACG ATTCAGCTCA AAGCTCCCTT TGCACCCTTC
CTCGCCCTGC TGACCTTCCC GGGCCTCTGT GCAGTTTCGC CGCAAGCCTA TCAACCGGCT
GCCGGACAAT TTCTACCGCA GCAATTTGTC GGCACTGGCC CCTATCGTCT GGAATCATTT
CAGGGCGATC GCCTGCGACT GGCGGCCAAT CGTGACTACT GGGGCGAGAA ACCCCGCAAC
GAAGGTCTCG ATATTCAGAT TTTCTCCAGC CCCTCCAATC TCTACAGTGC TCTAGGGACT
GGCTTAGTCG ATGTCGCCTA TCAGGGCTTG GATGCCGAAC AAATTCGGGG ATTGCGCCAG
CAGGCCGCTG AGGGCCGAAT TCAAATCAAC AATAACGATG GCCTTGGCAT TTATTACCTA
ACGGTCAACG TCCTCAGCCC GCCCCTCGAT CGCCCTGAGG TGCGGCAAGC CCTTGCACTG
GCGATCAACC GCGATGTGAT CCGCGATCGC GTTTTCTATG GACAGGTGCA ACCCCTCTAC
AGCTTGGTTC CTTCGGAGTT TCCGGTTTCG GAGCCGGATT TTCCGCGCAA CAATCCGGAG
CAAGCCCGAG CGGTATTAAC AGCCGCAGGC TATTCCTCCA GCAAGCCGCT CAAGCTCGAT
CTCTGGTATC GCTCCAATCT CAATAGCAAT GTCTTGGCTG CCAGTACCCT GCGTGCTTCA
GTCCAGCAGC AACTAGACGG TTTGATTGAC CTGCAGCTGC AGGGTGTGGA ATCGACCACG
GCCTACGAAA ATCTGGAGAA AGGTGCCTAT CCCCTATTTT TGCTCGACTG GTTGCCCGAC
TTTCTGGATG CCGATAACTA CTTGCAGCCT TTTCTCGCTT GTAGCCAGGG CAATCCGCAG
CAGGGCTGTC AGTCCGGCAG CAGCTACTAT CAAGGCTCTT TCTACTACAG CGATCGCGCC
AACCAACTGC TTCAACAAGC AGGAGAAAGT ACGGATCCCC AAGCTCGCGA TCGCCTGTTG
CGGGAGCTTC AACAGCTCAG CGCTGAGGAT TTACCCTTCA TTCCGCTCTG GCAAAATCGC
GAATATCTAT TCAGTCAGCC CTACATCCAG GGTGGCAATA TTCGAGCCTC GGGGGCGATC
GCCTTTGGCC AACTTCGCAA GGTGAAAAAT GTCGCGCGCT AG
|
|---|
| Protein sequence | MRLRQLLLGC LLLFWLCVGL VGCVALPKAI ESDRIVVGTA ARLRTLDPAD AYELLSGALL
YALGDRLYTT RPDSVEIVPQ LATALPEISP DGLTYRIPLR QDVRFHDGSP FNAAAMAFSL
QRFIKNGGRP SYLLGDRVAS IQATGDYELT IQLKAPFAPF LALLTFPGLC AVSPQAYQPA
AGQFLPQQFV GTGPYRLESF QGDRLRLAAN RDYWGEKPRN EGLDIQIFSS PSNLYSALGT
GLVDVAYQGL DAEQIRGLRQ QAAEGRIQIN NNDGLGIYYL TVNVLSPPLD RPEVRQALAL
AINRDVIRDR VFYGQVQPLY SLVPSEFPVS EPDFPRNNPE QARAVLTAAG YSSSKPLKLD
LWYRSNLNSN VLAASTLRAS VQQQLDGLID LQLQGVESTT AYENLEKGAY PLFLLDWLPD
FLDADNYLQP FLACSQGNPQ QGCQSGSSYY QGSFYYSDRA NQLLQQAGES TDPQARDRLL
RELQQLSAED LPFIPLWQNR EYLFSQPYIQ GGNIRASGAI AFGQLRKVKN VAR
|
|---|
| |