Gene Synpcc7942_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0819 
Symbol 
ID3775997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp813221 
End bp813886 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content60% 
IMG OID637799236 
Productphosphoribosylformylglycinamidine synthase I 
Protein accessionYP_399838 
Protein GI81299630 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 
TIGRFAM ID[TIGR01737] phosphoribosylformylglycinamidine synthase I 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTCG GCGTTATTGT TTTCCCCGGC TCAAACTGCG ATCGCGATGT GCAGTGGGTC 
ACTGCAGGTC TGCTAGGTCA GTCCACCCGC ATGATCTGGC ACGAGGAGCG CGATCTCTCG
GGCTTGGATT TGATTGTCGT GCCCGGTGGC TTTAGCTACG GCGACTATCT CCGTTGCGGC
GCGATCGCCC GCTTTTCGCC GGCCATGCAA GCAACGGTTG CCTTCGCTGA GGCGGGTGGC
TTGGTCTTGG GCATTTGCAA TGGCTTCCAA ATCCTGACAG AAGTTGGGCT CTTGCCCGGT
GCGCTGGTGC GCAATCGCGA TCTCCATTTC CGCTGCGAAA CTACACCCCT GCGAGTCGAG
CGGAGTGATC GCCCGTGGAG CCGCACCTAC CAGCAAGGTC AGATTCTGAA TCTGCCGATC
GCCCACGGGG AAGGTCGCTA CCATGCAGAC CCTGCAACCT TGGCAGCGCT GGAAGCGAAT
GGCCAAGTCC TGTTCCGCTA CCTCGACAAT CCCAACGGTT CTTGCAACGA TATTGCGGGC
ATCACCAACG TGGCTGGCAA TGTCTTGGGC ATGATGCCCC ACCCCGAACG GGCTGCAGAG
GCGATCGCAG GTAGTGTCGA TGGTCTGGGC CTGTTTGCAG GTCTGCTCGA GCCGGTTGCA
GCCTAG
 
Protein sequence
MNVGVIVFPG SNCDRDVQWV TAGLLGQSTR MIWHEERDLS GLDLIVVPGG FSYGDYLRCG 
AIARFSPAMQ ATVAFAEAGG LVLGICNGFQ ILTEVGLLPG ALVRNRDLHF RCETTPLRVE
RSDRPWSRTY QQGQILNLPI AHGEGRYHAD PATLAALEAN GQVLFRYLDN PNGSCNDIAG
ITNVAGNVLG MMPHPERAAE AIAGSVDGLG LFAGLLEPVA A