| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0816 |
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| Symbol | |
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| ID | 3775994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 810181 |
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| End bp | 812226 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637799233 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_399835 |
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| Protein GI | 81299627 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACTG TTCTCTTTAG TCTGACAGCA GAACTTGACT GGGGTTGGCG TATTGAGCAA
TGGCTTGATC CTCAGCAACT TTGGAAGCGA TCGCTCCAGG GATTTGCCGT TGAACAACTC
TGGCAAAACA GCACGTCTAG CCATGACTGG CAGGTAAGCT TTCGCCAAGC GATTCAATCC
CAGGGGATTT GGCAGCACAC GGGTAAATTA CGGGCAGACA GCATTGAGAG CAACTGGTAT
CTTCTAGCCT ATCCTTGTCA ACTGGAAAAC AGCAGTCATT GCTATCTAGG TGTCCTTCAA
ACCACAGTCG GGGGCAGGGA AGTCGAGGGA AGTAACCCCT GTTCAGAGGG TAAGCTCTCA
CCGCTCCTAC GCCATCGACT GCGACAACAA GAACTGGCTT TAGAGCACAG TAGCGATCTG
ATGATTCGCT GTAATAATCG AGGCTTTATC ACTTGGGCTA ATCAGGCACT GCTCGAACGT
CAAAATAAAT CACTCGACTC TATTGTTGGT ATTGACTTTA CTCAGTTGCG AACCCAGCCT
ACCGAGCGAC ATACCCTCTT ACAAATGCTC CGCACAGGGC AAGCACTAAA CGCTATGGTC
GAATATCAGA CAGAGGAGAA AGAATTTTAT CTCGTCCAAG AAAAACTGCT GCCCATTTTG
TCAGATGATG GGGAGTTAGA AACGATTGTC ATCGTCCAGC AGGATTTGAC TTTTCAGGCT
GCTGCTGAGA TCCGGACTCA ACAACAACTC CAGACCGATG CACTGACAGG TCTTCCCAAT
CGGAAAGGGA TGTACCAATC GATTCGCCAT AACCTCGGGC GGGTCGAGAC ACACAAGCAA
CCCTTCGCCC TCTTGCGAAT CAACCTTGAT CGCTTCCAAC GCGTCAACGA TGCTGCGGGC
TATCACTTCG GTGACTATCT CTTGCGTAGC TTGGCTCTCA ATTTGCGGCG GGTGCTCGGC
TATGGTACTG AGCTGGCCTG TTTGGGAGGC GATGAATTTG CGGCTGTGAT TGCCCCTTGC
TACCAGGAAG AAGAGGCGAT TGCGATCGCG GATGAAGTCC GTAGTGCGAT CGCGATCTCT
GGTTCTCTTG CAGCAGCTGC GGGGATTAGT CTTACGGCGA GTATTGGCAT CGTTCTGGTC
GATACCAATT TGACTGAGGA GATGGTGCTC GATCGCGCCA ATCAGGCAAT GTTTGCCGCC
AAACGCAGGG GCGGGGATTG TACAGTGATC TATCGCCTCC CTTTACACGA CAGTATTCGC
CAAGAAGCAG CCTTACAGTT TGCCCTGCGC CAGGCGATCG CCGAACAAGA ACTCAAGCTC
GCTTATCAGC CCATTATTAG CCTGCGTACT GGTCAAATCA TTAGTCTCGA AGCGTTGCTG
CGCTGGAACC ATCCCCATTT CGGCTACATT TCACCCGCCC TTTTCATTCC CTTGGCTGAA
GATTCTGGGC AAATTGAATC GCTAGGAGAA TGGGCTGTTC ATGAAGCCTG CCATCAGCTA
GCGGAGTGGG CTAAACAACC CGATCTAGCG CACTTGCGCG TAGCAGTGAA CTGCAGCTTT
GTTGATCTCA AGACCGAACG CTGGGCTGCG ACAGTCAAGA CAGCACTCCA GAGTAGTCAA
CTGCCACCTT CCCAGTTGAT TGTGGAATAT ACCGAAAGCG CAATTGCCAA GGATCCAGCT
GCTGCGATCG CCCTCAGTTC CTATCTACAA GATCTAGGAG TAGATGTCGC ACTCGATGAC
TTTGGATCGG GGTATTCCAG CATGGCCTAC CTCATTCAAT TCCAAGCGCA GGGGCTCAAA
ATCGATCGCA GTTTAATCAC CCCGATCGTA GAAGACGAGC GATCGCAGGC CGTGGTGCGT
ACGATTATTG ATTTAGCCAA ACGGCTGGGT TTGAGAACCA CTGCAGAAGG CGTAGAAGAA
CGAGAACAAC TGGAATTACT CCATAGTTGG GGCTGTGATT TTGCCCAAGG ATTCTACTTC
AGCAGACCCC TACTGGCTGA CGATCTCCCT GACTTTATTC GCAACTACGA AGGATTGTCC
TTGTGA
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| Protein sequence | MPTVLFSLTA ELDWGWRIEQ WLDPQQLWKR SLQGFAVEQL WQNSTSSHDW QVSFRQAIQS
QGIWQHTGKL RADSIESNWY LLAYPCQLEN SSHCYLGVLQ TTVGGREVEG SNPCSEGKLS
PLLRHRLRQQ ELALEHSSDL MIRCNNRGFI TWANQALLER QNKSLDSIVG IDFTQLRTQP
TERHTLLQML RTGQALNAMV EYQTEEKEFY LVQEKLLPIL SDDGELETIV IVQQDLTFQA
AAEIRTQQQL QTDALTGLPN RKGMYQSIRH NLGRVETHKQ PFALLRINLD RFQRVNDAAG
YHFGDYLLRS LALNLRRVLG YGTELACLGG DEFAAVIAPC YQEEEAIAIA DEVRSAIAIS
GSLAAAAGIS LTASIGIVLV DTNLTEEMVL DRANQAMFAA KRRGGDCTVI YRLPLHDSIR
QEAALQFALR QAIAEQELKL AYQPIISLRT GQIISLEALL RWNHPHFGYI SPALFIPLAE
DSGQIESLGE WAVHEACHQL AEWAKQPDLA HLRVAVNCSF VDLKTERWAA TVKTALQSSQ
LPPSQLIVEY TESAIAKDPA AAIALSSYLQ DLGVDVALDD FGSGYSSMAY LIQFQAQGLK
IDRSLITPIV EDERSQAVVR TIIDLAKRLG LRTTAEGVEE REQLELLHSW GCDFAQGFYF
SRPLLADDLP DFIRNYEGLS L
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