Gene Synpcc7942_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0815 
Symbol 
ID3775993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp809365 
End bp810096 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content56% 
IMG OID637799232 
ProductATPase 
Protein accessionYP_399834 
Protein GI81299626 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTG CGCCACTGCT TGATCTAGAC CAAGTTTTTG CGGGCTACCT TCCCGATCTG 
GATATTGTCC AAGGGGTCAA TCTCCAAGTC GCGGCGGGTG AATTGCTGAC GCTCTTGGGA
CCCAATGGCG CCGGAAAATC TACTTTGGCT AAGACGCTAC TGGGTCTGGT ACCAGTACGC
AGTGGCAGCA TTCGTTTCCG CGGGCAAGAG ATCAGTCGTC TCAGCTCCGA AGCGATCGTG
CGGTTGGGCA TTGGTTATGT GCCGCAAGTG CGAAACGTTT TTGCCAGCTT GACGGTAGCT
GAAAATCTAG AGATGGGGCT GTTCCAAATC CGGCCCCAGC ATCGACCCGC TGCGATCGCC
CGCATCTATG ACCTGTTCCC GACCCTCGCC ACTCGGCGAT CGCAGCGAGC TGGAACGCTG
TCCGGCGGTG AACGTCAACT CTTAGCAATG GGGCGAGCCT TGGCGGCAGA ACCGACGCTG
TTGGTTTTGG ATGAACCATC AGCAGCCCTG TCGCCGCTGA TGGTTGCGAC GGTCTTCGAA
CAAATTCGTG CGATTAACAA CAGCGGCACC ACAATCATTT TGGTGGAGCA AAACACCCGT
CGTGCCCTAC AACTAGCCGA TCGTGGTTGC ATTCTTGAGA GTGGTCGCGA TCGTCAAACT
GGTCCAGCTG CAGAGCTTCT TGATGATCCG CTCCTCGGTG AACTCTATCT AGGGCGATCG
CAGGAGTCGT AA
 
Protein sequence
MNAAPLLDLD QVFAGYLPDL DIVQGVNLQV AAGELLTLLG PNGAGKSTLA KTLLGLVPVR 
SGSIRFRGQE ISRLSSEAIV RLGIGYVPQV RNVFASLTVA ENLEMGLFQI RPQHRPAAIA
RIYDLFPTLA TRRSQRAGTL SGGERQLLAM GRALAAEPTL LVLDEPSAAL SPLMVATVFE
QIRAINNSGT TIILVEQNTR RALQLADRGC ILESGRDRQT GPAAELLDDP LLGELYLGRS
QES