Gene Synpcc7942_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0813 
SymbolhisZ 
ID3775991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp807839 
End bp809101 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content61% 
IMG OID637799230 
ProductATP phosphoribosyltransferase regulatory subunit 
Protein accessionYP_399832 
Protein GI81299624 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis 
TIGRFAM ID[TIGR00443] ATP phosphoribosyltransferase, regulatory subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.493486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCATC AGCCTCCAGC CGGTACTCGC GACCTGCTGC CCCAAGACGT GACCCAAAAG 
CGCTGGATCG AAAGCCGCTT GCAGCAGGTT TTTCAGCAGT GGGGCTATCA ACGCATCATC
ACGCCGACAT TGGAGCGGTT GGATACCTTG GTAGCCGGCG GTGCTGTGCA GCGCTCAGCG
GTAATCCAAG TGCAGTCCGA TGAGGAGTCG GGCTTGGGAC TGCGGCCGGA GTTGACGGCT
TCGATCGCGC GAGCGGCAGT CACTCGGCTG GCAGGTTCTT CCCTGCCGCT GCGGCTCTAC
TACCTCGCCA ATGTCTTTCG TCCGGCCTTC CAAGGCGATC GCCTCCAGCA GCGCGAACTG
TTTCAAGCTG GCGTGGAACT GCTGGGGGTC GGCGGGACGC TGGCAGATGC TGAAGTGTTG
CACGTGCTGG CGGATGCTTT GGCGGAGCTG GGCTTTGGAC AGCCGCCGCT GGGGAGCTGG
CATCTAGTCG TCGGTGAAGC CAGTCTGACC CGATCGCTCC TACAACCCTT CCCCAAAGAC
CTGCGCGAAA AGGTGCGGCA GGCGATCGCT CAGCTCGATC GCGTCACCTT AGAATCTCTG
CCCCTCGAGT CCCAACTCCG CGATCGCGCC TTGTTACTGC ATGATCTACG CGGTCAACCA
GATCAGGTTT TTGCCAAACT CCAGCAACTG ACCCTGACTC CCCTCGAACA GACCCTGCGC
GATCGCCTAG CCCAACTGGT TGAGCTCTAT AACGCTAGCG CTGGCCCCCA AGATTCGCCG
TTGCTGCTTG ATTTAAGCTT GCTGCGCAGC TTTGACTACT ACACTGGCAT CGTCTTCGAA
GTCGTCTATG AAACACCGAC TGGGCCTTGG GTGTTGGCTC AGGGCGGCCG CTATGATCGC
CTCTTGGATG TCTACGATCC GCAGGCAGCC GGTCAGCCCG GCATCGGTTT CTCCTGCAAC
ATTGAGAACC TGCAACAGGT ATTGCTAGCG GCCAACCGCT TGCCCCACCG CCCGCCCGCC
ATCGATCAAC TGGTGATTCC CGTTGATTCC GAGGCTTATG GGGCTGCTTT GGCCGAAGCC
CAGCGTCTGC AGCGTCAGGA CCAGCTGCGA GTGGAGCTCT ACCTCGACAG CGATCGCCGG
CCAGAAGTGG TGCAGGCCTT TGCCCAGCGG CGACGGATTG GTCGCATTGT TTGGGTGAGT
AGCGGCAGCG CCCCCCAGAG TGAAGCGGTG GCCGTGGCGG AGCGAGCCAC CACAACTTGT
TAG
 
Protein sequence
MVHQPPAGTR DLLPQDVTQK RWIESRLQQV FQQWGYQRII TPTLERLDTL VAGGAVQRSA 
VIQVQSDEES GLGLRPELTA SIARAAVTRL AGSSLPLRLY YLANVFRPAF QGDRLQQREL
FQAGVELLGV GGTLADAEVL HVLADALAEL GFGQPPLGSW HLVVGEASLT RSLLQPFPKD
LREKVRQAIA QLDRVTLESL PLESQLRDRA LLLHDLRGQP DQVFAKLQQL TLTPLEQTLR
DRLAQLVELY NASAGPQDSP LLLDLSLLRS FDYYTGIVFE VVYETPTGPW VLAQGGRYDR
LLDVYDPQAA GQPGIGFSCN IENLQQVLLA ANRLPHRPPA IDQLVIPVDS EAYGAALAEA
QRLQRQDQLR VELYLDSDRR PEVVQAFAQR RRIGRIVWVS SGSAPQSEAV AVAERATTTC