| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0801 |
|---|
| Symbol | |
|---|
| ID | 3775978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 795123 |
|---|
| End bp | 795812 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637799217 |
|---|
| Product | superoxide dismutase |
|---|
| Protein accession | YP_399820 |
|---|
| Protein GI | 81299612 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0605] Superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.818705 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCAGG AGACGCTCAG ACGAGGGAAG CGTCCGGTTT TTATTAATCT AGGTAAAGAC
AACCTGCTCA AGAGAACACA CTGCATGTCC TACGAATTGC CAGCATTGCC CTTTGACTAC
ACGGCACTGG CGCCTTACAT CACCAAGGAA ACGCTGGAGT TCCACCACGA TAAGCACCAC
GCGGCCTACG TCAATAACTA CAACAACGCC GTCAAAGACA CCGACCTCGA TGGCCAGCCG
ATCGAAGCCG TGATCAAAGC GATCGCGGGT GACGCTAGCA AAGCCGGTCT GTTCAACAAT
GCGGCTCAAG CTTGGAACCA CAGCTTTTAC TGGAACTCGA TCAAGCCCAA TGGCGGTGGC
GCTCCCACCG GCGCGTTGGC CGACAAAATC GCCGCTGACT TCGGCAGTTT CGAGAACTTC
GTGACCGAGT TCAAACAAGC CGCAGCAACC CAGTTCGGCA GCGGCTGGGC TTGGTTGGTG
CTGGACAATG GCACCCTCAA AATCACCAAA ACCGGCAACG CCGACACCCC GATTGCCCAT
GGTCAAACCC CGCTACTGAC CATCGATGTC TGGGAACACG CTTACTACCT CGACTACCAA
AACCGTCGTC CCGACTACAT CAGCACCTTC GTTGAGAAGC TGGCGAACTG GGACTTCGCC
TCTGCCAACT ACGCAGCTGC GATCGCTTAG
|
|---|
| Protein sequence | MLQETLRRGK RPVFINLGKD NLLKRTHCMS YELPALPFDY TALAPYITKE TLEFHHDKHH
AAYVNNYNNA VKDTDLDGQP IEAVIKAIAG DASKAGLFNN AAQAWNHSFY WNSIKPNGGG
APTGALADKI AADFGSFENF VTEFKQAAAT QFGSGWAWLV LDNGTLKITK TGNADTPIAH
GQTPLLTIDV WEHAYYLDYQ NRRPDYISTF VEKLANWDFA SANYAAAIA
|
|---|
| |